ggKbase home page

sw_4_scaffold_216_27

Organism: SW_4_Nanohaloarchaea_43_9

near complete RP 37 / 55 MC: 5 BSCG 22 / 51 ASCG 36 / 38 MC: 3
Location: 25584..26141

Top 3 Functional Annotations

Value Algorithm Source
tRNA intron endonuclease n=1 Tax=Candidatus Nanosalinarum sp. J07AB56 RepID=G0Q9W3_9EURY similarity UNIREF
DB: UNIREF100
  • Identity: 59.9
  • Coverage: 177.0
  • Bit_score: 223
  • Evalue 2.20e-55
tRNA intron endonuclease {ECO:0000313|EMBL:EGQ40775.1}; TaxID=889962 species="Archaea; Nanohaloarchaeota; Nanohaloarchaea; Candidatus Nanosalinarum.;" source="Nanosalinarum sp. (strain J07AB56).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 59.9
  • Coverage: 177.0
  • Bit_score: 223
  • Evalue 3.10e-55
tRNA-splicing endonuclease subunit alpha similarity KEGG
DB: KEGG
  • Identity: 37.9
  • Coverage: 174.0
  • Bit_score: 136
  • Evalue 5.90e-30

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Candidatus Nanosalinarum sp. J07AB56 → Candidatus Nanosalinarum → Nanohaloarchaea → Nanohaloarchaeota → Archaea

Sequences

DNA sequence
Length: 558
TTGATNNNNNNNNNNACAGCTACAGGTAAAATTTCCGGTACCAAAGTCAAGGTATGGGATGAGGAAGAAGCCGAAGAAGTTCACAGCAACTTCTACTACGGAAAGATAATCGAGGAAGAAGGTTACTTGGAGCTTTCACTCGTCGAAGCGCTTCACCTTGTTGACCGCGATGAACTTGAGATAATTGAAGATGACGAAGTTCTCGACAGGGAGGAACTTTTCCAGAGATTCAGCGAGGAAGACGATGAGTTTGACCAGAAATATGCGGCTTACTCTGATCTCCGTGAGAGAGGTTTTATAGTGAAGACCGGTTTTAAGTTTGGCACTCATTTTAGGGTCTATCCTCGTGGAGTTAATCCTTACAAGGAAGGACCGAAGGAAGAAAGAGAACATACAAAGTGGATTGTACACGCTGTACCTGAAGATTACAACCAGAGCTACGAAAAGATGTCTCGTGCAGTGAGGTTGGCCCACAATATCAGGGCCAAGATGTTGTGGGCGGTAACCGATTCCGAGAGACAGGTAACCTACTATGAAGTTGAGAGGGTTACTCCTTAA
PROTEIN sequence
Length: 186
LXXXXTATGKISGTKVKVWDEEEAEEVHSNFYYGKIIEEEGYLELSLVEALHLVDRDELEIIEDDEVLDREELFQRFSEEDDEFDQKYAAYSDLRERGFIVKTGFKFGTHFRVYPRGVNPYKEGPKEEREHTKWIVHAVPEDYNQSYEKMSRAVRLAHNIRAKMLWAVTDSERQVTYYEVERVTP*