ggKbase home page

sw_4_scaffold_407_11

Organism: SW_4_Nanohaloarchaea_43_9

near complete RP 37 / 55 MC: 5 BSCG 22 / 51 ASCG 36 / 38 MC: 3
Location: 7501..7734

Top 3 Functional Annotations

Value Algorithm Source
like-Sm ribonucleoprotein core; K04796 small nuclear ribonucleoprotein id=18312061 bin=Haloredivivus tax=Haloredivivus similarity UNIREF
DB: UNIREF100
  • Identity: 61.5
  • Coverage: 78.0
  • Bit_score: 98
  • Evalue 3.50e-18
Like-Sm ribonucleoprotein core {ECO:0000313|EMBL:EHK00710.1}; TaxID=1072681 species="Archaea; Nanohaloarchaeota; Nanohaloarchaea; Candidatus Haloredivivus.;" source="Haloredivivus sp. (strain G17).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 61.0
  • Coverage: 77.0
  • Bit_score: 98
  • Evalue 4.80e-18
small nuclear ribonucleoprotein similarity KEGG
DB: KEGG
  • Identity: 49.3
  • Coverage: 71.0
  • Bit_score: 74
  • Evalue 1.50e-11

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Candidatus Haloredivivus sp. G17 → Nanohaloarchaea → Nanohaloarchaeota → Archaea

Sequences

DNA sequence
Length: 234
ATGGGAAACGATGACAGTGGAAAAAGACCTTTAGATGTACTAGATACTGCAAAAGGTGACAGAGTAATAGCAAAACTAAAAGGAGGACAAACAGTTTCAGGGAACCTGAAAGCATTCGACCTTCATCTAAACATGTGGCTTGAAGATGCCTCCGTAAACGAAGATGGAGGACAAACTGACTACGGAAAACTGATCATCCGTGGAGACAATGTAATACTGGTCAGCCCTGAATAA
PROTEIN sequence
Length: 78
MGNDDSGKRPLDVLDTAKGDRVIAKLKGGQTVSGNLKAFDLHLNMWLEDASVNEDGGQTDYGKLIIRGDNVILVSPE*