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sw_4_scaffold_10316_1

Organism: SW_4_Parcubacteria_46_8

partial RP 33 / 55 MC: 1 BSCG 35 / 51 MC: 4 ASCG 7 / 38 MC: 2
Location: 236..1615

Top 3 Functional Annotations

Value Algorithm Source
Type II secretion system protein E Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_09_41_20_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 67.0
  • Coverage: 460.0
  • Bit_score: 606
  • Evalue 3.30e-170
Tfp pilus assembly protein PilB; K02652 type IV pilus assembly protein PilB id=5803124 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome similarity UNIREF
DB: UNIREF100
  • Identity: 64.9
  • Coverage: 459.0
  • Bit_score: 602
  • Evalue 3.40e-169
secretion system protein E similarity KEGG
DB: KEGG
  • Identity: 46.0
  • Coverage: 461.0
  • Bit_score: 415
  • Evalue 2.80e-113

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Taxonomy

R_RIF_OD1_09_41_20 → RIF-OD1-9 → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 1380
ATGCGAATTAAAAACCAACAACTGATTGACTTTCTTGATGACGTGCATATGGTAACCGATGAGGAGCTGGAAAAAGCGAAGCGACGCGCGGAAAAGGAAAACCAGGATATTGGCAGTGCCTTAGTTAATGACGGGGTTATAGATCCGGACGAGTTGCGCCGAGTGAAAGCGCACGTCATGGGGATGCCGTTTGTTAATTTAAAAGAAAAGGATATTGATTTTCAGACGCTTTCAATGATTCCCGAGCCGGTCGCCCGTAATCATAATATTATCGCCTACAACAACAAGAATGAAGAGCTTGAGGTGGCGATGCTTGATGTTGATGATTTGCAGGCGATTGATTTCGTTCGCAAAAAAACAGGAAAAAAGATTAAGCCGCGAATGACCGACAGTGAGTCGGTATCGGCGGCGCTGCAGGAGTATCAGGAATCACTCGACAGTGAGTTCAGCGATATTATCGAAAGCGAGTCCCAAGAGCTTGAGGCGATTCCGGAAAACAAAAAAGAAGACGAGCCGTCGGCTGAGGAACTTGCCGAACTAGCCGAGGATCTACCAGTTGTTCGGATTGTCCGCGCACTTTTGCGGCACGCAATTATTCAGGACGCATCAGATATCCACATTGAGCCGATGGAAGAAAAAGTGCTCGTCCGGTACCGTATTGACGGAATCTTACATGATGCTATGGAGCTGCCGGCAGAATCCGCCCAGCCGATTGTGGCCCGCATTAAAGTGCTTTCCGATCTCAAGCTTGATGAGAAACGCCTGCCCCAAGACGGGCGATTTAAGGTGGAAATGGAGGGTGAAGAAGTATCGTTTCGGGTGTCAATTCTGCCGACCCAGTACGGCGAAAAGGTGGTCATGAGGCTTCTAAAGCAGAATGTTGAAGGTTTTACCTTACCAGAATTAGGTTTTCATGGCTCCAGCTTAGATCGGGTGCACTGGGCGACCAAACAATCCACCGGCATGGTACTGGTTACCGGCCCCACCGGCTCAGGAAAGACAACAACACTGTATACAATAATGGATATTCTCAATACACCCGAGGTGAATATCTCTACGGTAGAGGATCCGGTTGAGTATCAGATGAAACGGGTTAACCAAACGCAGGTAAAGCCGGACATTGGTTTTACCTTCAGCGAAGGCTTGCGCAGTCTTGTTCGTCAGGACCCGGATATCATCATGGTCGGAGAGATCCGTGATGAAAAAACAGCTCATCTGGCAGTTAATGCTGCCTTGACCGGCCATCTTGTGTTCTCAACCTTGCACACCAACTCCGCGGCCGGAGCCGTCCCCCGAATTTTGGATATGGACGCGGAGGCGTTTCTTCTGGTTTCAACTATCCGGCTTTTGATTGGTCAGCGGCTTGTCCGCGAGTTGTGT
PROTEIN sequence
Length: 460
MRIKNQQLIDFLDDVHMVTDEELEKAKRRAEKENQDIGSALVNDGVIDPDELRRVKAHVMGMPFVNLKEKDIDFQTLSMIPEPVARNHNIIAYNNKNEELEVAMLDVDDLQAIDFVRKKTGKKIKPRMTDSESVSAALQEYQESLDSEFSDIIESESQELEAIPENKKEDEPSAEELAELAEDLPVVRIVRALLRHAIIQDASDIHIEPMEEKVLVRYRIDGILHDAMELPAESAQPIVARIKVLSDLKLDEKRLPQDGRFKVEMEGEEVSFRVSILPTQYGEKVVMRLLKQNVEGFTLPELGFHGSSLDRVHWATKQSTGMVLVTGPTGSGKTTTLYTIMDILNTPEVNISTVEDPVEYQMKRVNQTQVKPDIGFTFSEGLRSLVRQDPDIIMVGEIRDEKTAHLAVNAALTGHLVFSTLHTNSAAGAVPRILDMDAEAFLLVSTIRLLIGQRLVRELC