ggKbase home page

sw_4_scaffold_10749_1

Organism: SW_4_Parcubacteria_46_8

partial RP 33 / 55 MC: 1 BSCG 35 / 51 MC: 4 ASCG 7 / 38 MC: 2
Location: comp(1..660)

Top 3 Functional Annotations

Value Algorithm Source
ychF; GTP-dependent nucleic acid-binding protein EngD; K06942 Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_47_20_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 58.0
  • Coverage: 188.0
  • Bit_score: 220
  • Evalue 2.40e-54
GTP-binding protein YchF; K06942 id=5803583 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome similarity UNIREF
DB: UNIREF100
  • Identity: 59.7
  • Coverage: 186.0
  • Bit_score: 216
  • Evalue 3.20e-53
GTP-binding protein YchF similarity KEGG
DB: KEGG
  • Identity: 57.5
  • Coverage: 186.0
  • Bit_score: 208
  • Evalue 2.50e-51

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RLO_RIF_OD1_11_47_20 → RIF-OD1-11 → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 660
ATGAATTACAGAACATGCAGCAGTAAAGCTTTGCTCTTTTGTAAGCTTCCCCTCGCTTACATCGGCACTGTTATTGCAGATCGTGACTTTATGTCATCTCGCTCGCTTGGAATAGTTGGATTACCAAATGTTGGAAAATCAACGCTTTTTACGGCGTTGACGAATCGTGCGGTGGGTGCGGAGAACTATCCGTTTTGTACCATCGATCCGACCATCGGTGTAGTGCCGGTACCGGACGAACGACTGCAAAAACTGTATGACTTTTCTGACTCTGCAGATATGCAGCCGGCTGCGTTTGAATTTGTCGATATTGCCGGATTGGTTGCCGGCGCGCACGAAGGGGAAGGGCTCGGTAATCAGTTTTTGGCAGCGATTCGTGAAGTGGATGCTATTGCGCATATGGTCCGTATTTTTGCTGATAAGTCGGTTACCCACGTTCATGGCGATATCGATCCGCTCAAGGATATCGAAGTGATAAACCAAGAGTTGATCCAGAAAGATATTGCAACGATTGAAAGGCGCTTAGAACAATTGAACGGACAGGCACGCACCGGAGAGACGGATGCACGAGAGTTGCGTGATTTTCTTGCTGATATCAAAGAAGCACTTACAGACGGTCGTCTGATATCTGAGCTTAATATACCCAATCAAGAAAAAGAG
PROTEIN sequence
Length: 220
MNYRTCSSKALLFCKLPLAYIGTVIADRDFMSSRSLGIVGLPNVGKSTLFTALTNRAVGAENYPFCTIDPTIGVVPVPDERLQKLYDFSDSADMQPAAFEFVDIAGLVAGAHEGEGLGNQFLAAIREVDAIAHMVRIFADKSVTHVHGDIDPLKDIEVINQELIQKDIATIERRLEQLNGQARTGETDARELRDFLADIKEALTDGRLISELNIPNQEKE