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sw_4_scaffold_3356_4

Organism: SW_4_Parcubacteria_46_8

partial RP 33 / 55 MC: 1 BSCG 35 / 51 MC: 4 ASCG 7 / 38 MC: 2
Location: comp(1389..2417)

Top 3 Functional Annotations

Value Algorithm Source
type IV pilus assembly protein PilM Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_09_41_20_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 37.9
  • Coverage: 340.0
  • Bit_score: 258
  • Evalue 1.60e-65
pilM; type 4 fimbrial biogenesis protein PilM; K02662 type IV pilus assembly protein PilM id=5803262 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome similarity UNIREF
DB: UNIREF100
  • Identity: 34.2
  • Coverage: 351.0
  • Bit_score: 219
  • Evalue 4.60e-54
type IV pilus assembly protein PilM similarity KEGG
DB: KEGG
  • Identity: 24.2
  • Coverage: 260.0
  • Bit_score: 73
  • Evalue 1.10e-10

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Taxonomy

R_RIF_OD1_09_41_20 → RIF-OD1-9 → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 1029
ATGCCCGGATCGGGAATTAATATCTCCGATCACGGAATAAAAGTTGTACGGCTGCGGAAAGAAAAGACAAACTATCTCCCCGAGATGGTAAACGAGTATGCGATAGAAGACGGTGTAGTAGAAGACGGCAAAATACAAGAGTCGAGTGCGATAACAGAAAAGATGGCAATGATCCACGACCGCCATGATGTGCGGTTTGTGTATCTGTCAATCCCCGAAGAGCACGGATATGTATTTGGTTTGCGTATTCCGGCAGTGCAAAAAGAATCAATACACGACACGGTTGCTGTACGGCTTGCAGAGCATGTACCGCTTTCACGAGAGGATGCCGTGTTTGGGTGTGATCTTGTAGAACGCATACCGGAAGAACAAGAGATGTATGTAAATGTGGCTGCGTTACCAAAAGAAATTGTTGATAAGTATCAGAATATCTGCTTAGCAGCTGACCTTATACCGTTAGTATTTGAGATTGAAGCCCAAAGCATTCAGCGTGCGGTGATGGACCCGAATGATACGGCCCCGACCATGATCGTGGATATCGGACGTACCCGGACCGGGCTCTCTATAGTAAATAAAGGAGTTATTCAATATACCGCAACACTGAATATGGGAGGGGATATGTTCACGAGAGCTATTGCAAAACAGCGTGATAAATCATTCAAGGAAGCCGATCTGCTTAAGCAAGAGCGTGGCTTTGTGCGTGCCGGAGCGGACAACGAATTACACCTTGCATTGGTTAACTGTGTATCCGTGCTCGTGGATGAGATTCGTCGCCGCTTCGATTATTGGGGGTCGCACGCCGAGAAGCCGGGCCATACGAACCAGCCGATCCAAAAGATAATTCTCTCCGGCGGCAATGCATCAGTACCCGGACTTTCAGAGCATATCTCACGGGCAGTCGGTGTACCGGTGCGTTTGGCGAATGTATGGAAAAATGCATTCTCCACCGATGAGTATATTCCCGAGGTGGATTTTAATCACTCGCTTCAGTATGCTGCAGCAATTGGCCTCGGGCTTAACACCAAATAA
PROTEIN sequence
Length: 343
MPGSGINISDHGIKVVRLRKEKTNYLPEMVNEYAIEDGVVEDGKIQESSAITEKMAMIHDRHDVRFVYLSIPEEHGYVFGLRIPAVQKESIHDTVAVRLAEHVPLSREDAVFGCDLVERIPEEQEMYVNVAALPKEIVDKYQNICLAADLIPLVFEIEAQSIQRAVMDPNDTAPTMIVDIGRTRTGLSIVNKGVIQYTATLNMGGDMFTRAIAKQRDKSFKEADLLKQERGFVRAGADNELHLALVNCVSVLVDEIRRRFDYWGSHAEKPGHTNQPIQKIILSGGNASVPGLSEHISRAVGVPVRLANVWKNAFSTDEYIPEVDFNHSLQYAAAIGLGLNTK*