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sw_4_scaffold_3893_2

Organism: SW_4_Parcubacteria_46_8

partial RP 33 / 55 MC: 1 BSCG 35 / 51 MC: 4 ASCG 7 / 38 MC: 2
Location: 693..2378

Top 3 Functional Annotations

Value Algorithm Source
Tfp pilus assembly protein PilB; K02652 type IV pilus assembly protein PilB Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_10_49_18_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 51.1
  • Coverage: 566.0
  • Bit_score: 586
  • Evalue 4.30e-164
pilB1; type IV-A pilus assembly ATPase PilB; K02652 type IV pilus assembly protein PilB id=5803215 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome similarity UNIREF
DB: UNIREF100
  • Identity: 47.0
  • Coverage: 562.0
  • Bit_score: 555
  • Evalue 5.70e-155
secretion system protein E similarity KEGG
DB: KEGG
  • Identity: 36.9
  • Coverage: 575.0
  • Bit_score: 366
  • Evalue 1.40e-98

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Taxonomy

R_RIF_OD1_10_49_18 → RIF-OD1-1 → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 1686
ATGGTCAAATTCGATAATACAACCCAAGAGACCCTTGAGGAGTTCCGGGCAGAAGAAGAGGAGGATCTCGCCCGCATGATGGCCGACAAATACGGTGTGCAATACGTCAACCTCTCGGGCGTACCGATCGATACAAATGCAATGCGTTTGATCCCCGAGGATAAGTCGAAAGAATACGAGATGGTTGCATTTGATATGCTTGATAACGAAGTGGATGTAGCAGCGCGTATTCCGTCCGAAAGCGGTGTCAAAAAGATGCTTGAGAAACTCAAAAATGAAGGGTATCAACCAACACTCTATATTGCGTCTCGTAATAGCCTACAGACAGCATGGAAGCGCTACGAGGATATCTCCTATGCAAGTCAGCGATCGGAAGGGTTGCTGGATATATCTCGTGAGTCAATTGCGGAGTTTTTAGAAAAGGTAGATTCAGTCAAAAAGGCAAAGGAGCTTGTCGAGGAAACACTCGGTATGAAAAAAGCGGTACGCATTACGCGTATTGTCGAGATTATTATCGCCGCAGCGCTCGCACTTGACGCATCTGATATCCACGTAGAACCAAGAGACGATGGTGTCAGACTACGCATGCGTATTGACGGTGTACTGCGGCCAATAACAGCGCTCAATAGAGAAACGTATGAGCTACTTTTATCGCGTATTAAAATTTTGTCGGGGCTGAAATTGAATATTACCGATGAGAGTCAAGACGGGCGATTTACCATTGAGCTGGATGAAAGAGAGATTGAAGTGCGTACCTCGGCACTTCCGGGGCCAAACGGCGAGACTATCGTGTTGCGTGTGTTGGATCCGTCACGATTATTTCTGGATATGGGCAAGCTGGGCATGAATGAGCGACTGCAACACATTGTAAAAGAGCAGCTTGATCGACCGAATGGCGTTATCTTAAATACCGGCCCGACCGGCTCGGGCAAGACCACAACTCTGTATGCATTCCTTTCACGCGTAAATAAGCCGCGGATCAATATTATTACTATTGAGAACCCGATTGAGTACCACCTGGAGGGAGCAACCCAAACACAGGTAAATACATCTGAAGGATACAGTTTCTTTGAAGGGCTTACTGCCGCGCTACGACAAGACCCTGATATCATCATGGGGGGTGAGATTCGAGAAAATGAAACCGCCAAAACCGTCATACACGCCGGCCTTACAGGCCATCTTGTCTTTAGCACGCTTCACACGAACAACGCCGCCGGCGCATTCCCGCGCTTGATTGAGCTTGGAATTGAGCCGGACATTATGTCATCAGCCATTAATATGGCTATGGCACAGCGGTTGGTGCGTAAGCTTTGTCCTGACTGCAAACAAAAAAGACAACTCGGAAACGAAGAGAAAGAAACAATTTCTGATATATTTGATTCGCTCCCCGATAAAGAAGCAAAGCAGTCGCTCTGGCCGCAAGATGAGATATGGACTGCACCGGAGAAAAAAACCGACTGTACAACCTGCGGTGGTATGGGGTATAAGGGCCGAATCGGCGTTTTTGAGGCGGTGCTTGTCGATGAGCATATCGAAGAAACGCTACGCAGCGCACCGACCGAACGAGAGGTCCGAGAAGCAGTCAACCAACAAGGGTTGTACACAATGACCCAGGACGGTATCGTAAAAGTGCTGAATGGAGTAACTGATATAGAAGAACTCAGACGCGTCATTGAAGTACAATAA
PROTEIN sequence
Length: 562
MVKFDNTTQETLEEFRAEEEEDLARMMADKYGVQYVNLSGVPIDTNAMRLIPEDKSKEYEMVAFDMLDNEVDVAARIPSESGVKKMLEKLKNEGYQPTLYIASRNSLQTAWKRYEDISYASQRSEGLLDISRESIAEFLEKVDSVKKAKELVEETLGMKKAVRITRIVEIIIAAALALDASDIHVEPRDDGVRLRMRIDGVLRPITALNRETYELLLSRIKILSGLKLNITDESQDGRFTIELDEREIEVRTSALPGPNGETIVLRVLDPSRLFLDMGKLGMNERLQHIVKEQLDRPNGVILNTGPTGSGKTTTLYAFLSRVNKPRINIITIENPIEYHLEGATQTQVNTSEGYSFFEGLTAALRQDPDIIMGGEIRENETAKTVIHAGLTGHLVFSTLHTNNAAGAFPRLIELGIEPDIMSSAINMAMAQRLVRKLCPDCKQKRQLGNEEKETISDIFDSLPDKEAKQSLWPQDEIWTAPEKKTDCTTCGGMGYKGRIGVFEAVLVDEHIEETLRSAPTEREVREAVNQQGLYTMTQDGIVKVLNGVTDIEELRRVIEVQ*