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sw_4_scaffold_4268_3

Organism: SW_4_Parcubacteria_46_8

partial RP 33 / 55 MC: 1 BSCG 35 / 51 MC: 4 ASCG 7 / 38 MC: 2
Location: 1085..1714

Top 3 Functional Annotations

Value Algorithm Source
small-conductance mechanosensitive ion channel Tax=RIFCSPHIGHO2_01_FULL_OD1_56_18_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 54.8
  • Coverage: 228.0
  • Bit_score: 243
  • Evalue 3.30e-61
small-conductance mechanosensitive ion channel id=5803314 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome similarity UNIREF
DB: UNIREF100
  • Identity: 66.8
  • Coverage: 184.0
  • Bit_score: 237
  • Evalue 1.30e-59
small-conductance mechanosensitive ion channel similarity KEGG
DB: KEGG
  • Identity: 33.0
  • Coverage: 200.0
  • Bit_score: 126
  • Evalue 1.20e-26

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Taxonomy

R_OD1_56_18 → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 630
ATGAATCTAGCACCGTGGTCGGACGTACTTACCAGTTCATTTCAAGATCTGGGTGTGGTGCTGCAGAAAGCGGTCGCGCAGATAATCCGGTCGCTGAAGTTCGATAAGGCACTCCGGCATGCGGGCTTTGAAGAACCAATCAATCGTGCCGGCTTCACATTGGATGCGGGGAAGTTTGTCGGCGCATTGGTAAAATGGTTTGTTATCGTGGCGTTTCTTATCGCCTCGATGGATGTGTTGGGGTTGCAACAAGTGAATGTCTTTTTGCAGGATGCGGTGCTGGACTTTCTGCCGAAAGTTATCGTTGCGGTCTTGATTTTGATAGTTGGGGTGGCAATTGCCGAGACCATGGAAAGCATTGTAAGCGGTACTGCGCGGTCGGCACATATGAAATCAGCCAATTTCTTAGGTGCGGTCACTCGCTGGACAATCTGGATCTTTACCGGTTTGGCGGCGCTGTATCAGCTCGGTGTTGCCTCTGCGTTCGTGCAAACGCTCTTTACGGGAATCGTTGTCGCACTGTCGCTGGCCTTCGGACTCGCCTTCGGGCTGGGCGGACAAGGTGAAGCTCGGCGGTATCTCAAACAATTACGGGAAGAGATATCTCATCAGGAAGATTCTGAAAGTTAA
PROTEIN sequence
Length: 210
MNLAPWSDVLTSSFQDLGVVLQKAVAQIIRSLKFDKALRHAGFEEPINRAGFTLDAGKFVGALVKWFVIVAFLIASMDVLGLQQVNVFLQDAVLDFLPKVIVAVLILIVGVAIAETMESIVSGTARSAHMKSANFLGAVTRWTIWIFTGLAALYQLGVASAFVQTLFTGIVVALSLAFGLAFGLGGQGEARRYLKQLREEISHQEDSES*