ggKbase home page

sw_4_scaffold_6567_4

Organism: SW_4_Parcubacteria_46_8

partial RP 33 / 55 MC: 1 BSCG 35 / 51 MC: 4 ASCG 7 / 38 MC: 2
Location: 1761..2195

Top 3 Functional Annotations

Value Algorithm Source
Uncharacterized protein {ECO:0000313|EMBL:KKR53538.1}; TaxID=1618784 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA1_40_21.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 50.3
  • Coverage: 145.0
  • Bit_score: 160
  • Evalue 2.60e-36
Type II secretion system F domain; K02653 type IV pilus assembly protein PilC id=5803078 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome similarity UNIREF
DB: UNIREF100
  • Identity: 49.0
  • Coverage: 145.0
  • Bit_score: 143
  • Evalue 1.30e-31
type II secretion system f domain similarity KEGG
DB: KEGG
  • Identity: 31.5
  • Coverage: 143.0
  • Bit_score: 96
  • Evalue 9.10e-18

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

GWA1_OD1_40_21 → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 435
ATGCTTTTCGAATATACGACAATAGATGAAGACGGAAACGAAGAGACCGGTGAGATTGAAGCAGTCAACAAAGAAGTTGCACTCAACTCGCTCCAGCGGCGTGGTCTGTACGTGGCTGATATACAAGAGAAAGATGAAAGGTCTATTTTGCAGACACGACTTACATTTCTGGAGAGTGTTTCAAGCAAAGAGATGGTTGTTACCTCACGACAGATATCTACTCTTTTTAACGCGGATGTGTCTGCACTGAAAGTGTTCCGTATGCTGGCCGCAGAGAAAGATAATGAGTTGTTGCGGGATGTGCTCAATGATATTGCGCGAGAGTTGGAGGGGGGCAGTTCAATAGCGAATGCGATGGAGAAACACACTGATGTGTTCTCCGACTTTTATGTAAGTATGGTGCGTGCCTGCGAGGAGTCAGGTCAGCTTGATCAA
PROTEIN sequence
Length: 145
MLFEYTTIDEDGNEETGEIEAVNKEVALNSLQRRGLYVADIQEKDERSILQTRLTFLESVSSKEMVVTSRQISTLFNADVSALKVFRMLAAEKDNELLRDVLNDIARELEGGSSIANAMEKHTDVFSDFYVSMVRACEESGQLDQ