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sw_4_scaffold_1156_13

Organism: SW_4_Bacteroidetes_Order_II__Incertae_sedis_67_19

near complete RP 46 / 55 MC: 1 BSCG 47 / 51 ASCG 12 / 38 MC: 1
Location: 16969..17928

Top 3 Functional Annotations

Value Algorithm Source
rpoD; RNA polymerase sigma-70 factor similarity KEGG
DB: KEGG
  • Identity: 89.3
  • Coverage: 224.0
  • Bit_score: 396
  • Evalue 5.50e-108
rpoD; RNA polymerase sigma-70 factor; K03086 RNA polymerase primary sigma factor id=24657877 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber similarity UNIREF
DB: UNIREF100
  • Identity: 89.3
  • Coverage: 224.0
  • Bit_score: 396
  • Evalue 1.90e-107
RNA polymerase sigma-70 factor {ECO:0000313|EMBL:CBH25085.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibact similarity UNIPROT
DB: UniProtKB
  • Identity: 89.3
  • Coverage: 224.0
  • Bit_score: 396
  • Evalue 2.70e-107

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Taxonomy

Salinibacter ruber → Salinibacter → Bacteroidetes Order II. Incertae sedis → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 960
ATGCTGGACCAATACCTCCAGGAAATTGGCCAGATCGACTTGCTCGAACCCGAGGAAGAAGTGGAGCTGGCCCGGCGCATCGACGACGGCGACGACGAGGCGCTCCACAAGCTGGTGCGCGCGAACCTGCGCTTCGTCGTCTCGGTCGCCAAGAAGTATCAGGGGCAGGGCCTCTCGCTGTCGGACCTGATCAACGAGGGCAACTACGGGCTTATCAAGGCCGCCAAGCGCTTCGACGAGACGCGCGGCTTCAAGTTCATCTCCTACGCGGTCTGGTGGATTCGGCAGGCCATCCTCCAGGCGCTGGCCGAGCAGTCGCGCGTGGTGCGGCTCCCCCTGAACCGCATCGGCACGATCTCGAAGATTCGTAAGAAAAGCGCCAAGCTCAGCCAGGAGCACGACCGCGACCCCAACATCGAAGAGCTGGCCGAAGAGCTGGACATCGATGTGCAGAAGGTGCGCGAGGCGATGCAGCACTCCAGTCGCCACCTCTCGATGGACGCGCCCTTCAATGAGGAGGACGAAAACTCGCTCCTCGACGTGCTCCCCGACGAAGACACCGGCACGCCCGACGACGAGATGGTCGACGAGTCGGTCAAGGTCGACATCGAGCGCGCGCTCTCGATGCTGCACCCGCGCGAGGCGGAAATCACGCGCCTCTACTTCGGCATACGCGCGAGCGAGTGCGCCAGATCAAGGAGAAGGCCCTGCGCAAGCTCCGCCAGAAGCACCGCAAGGAAGACCTTCAGATGCACATTGGCTGACGCCGGTTTCGGGTTTGGGGTTTCGCCCCAGGAGCACTTCTACCACAAGGGCATGACCCACAGGGGGCCCCTCACTCCGTTCAGGGCGCGGGTTTGGGGTTCTGGGTTCTTTCGAGTGAGGCGTCGTGCTTTTTTGGCGCGGCGTCTTCGCTGTTGTGCGACCGGCCGGCGTTGCATGGGGGGGCGTTGCACGTAG
PROTEIN sequence
Length: 320
MLDQYLQEIGQIDLLEPEEEVELARRIDDGDDEALHKLVRANLRFVVSVAKKYQGQGLSLSDLINEGNYGLIKAAKRFDETRGFKFISYAVWWIRQAILQALAEQSRVVRLPLNRIGTISKIRKKSAKLSQEHDRDPNIEELAEELDIDVQKVREAMQHSSRHLSMDAPFNEEDENSLLDVLPDEDTGTPDDEMVDESVKVDIERALSMLHPREAEITRLYFGIRASECARSRRRPCASSARSTARKTFRCTLADAGFGFGVSPQEHFYHKGMTHRGPLTPFRARVWGSGFFRVRRRAFLARRLRCCATGRRCMGGRCT*