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sw_4_scaffold_267_7

Organism: SW_4_Bacteroidetes_Order_II__Incertae_sedis_67_19

near complete RP 46 / 55 MC: 1 BSCG 47 / 51 ASCG 12 / 38 MC: 1
Location: 8327..12751

Top 3 Functional Annotations

View all annotations
Value Algorithm Source
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322, ECO:0000313|EMBL: similarity UNIPROT
DB: UniProtKB
  • Identity: 77.2
  • Coverage: 999.99
  • Bit_score: 2251
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta'''' n=1 Tax=Salisaeta longa RepID=UPI0003B65FF5 similarity UNIREF
DB: UNIREF100
  • Identity: 76.9
  • Coverage: 999.99
  • Bit_score: 2262
  • Evalue 0.0
rpoC; DNA-directed RNA polymerase subunit beta' similarity KEGG
DB: KEGG
  • Identity: 77.2
  • Coverage: 999.99
  • Bit_score: 2251
  • Evalue 0.0

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Taxonomy

Salinibacter ruber → Salinibacter → Bacteroidetes Order II. Incertae sedis → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 4425
ATGGCCTACGGAAAGACCAACGACGTCGAAGAGGACTTCTCGCAGCTTTCGGTGAGTCTCGCCTCGCCGGAGGACATCCTCGAACGCTCGCACGGAGAGGTCCTCAAGCCCGAGACGATCAACTACCGCAGCTTTAAGCCGGAGAAAGACGGCCTCTTCTGCGAGAAGATCTTCGGTCCGGTCAAGGACTGGGAGTGCCACTGCGGCAAGTACAAGCGCATTCGCTACAAGGGCATCATCTGCGACCGTTGCGGCGTAGAGGTGACCCGCAAGGCCGTGCGCCGCGAGCGCATGGGCCACATTACCCTGAGCGTGCCGGTGGTCCACATCTGGTACTTCAAGACGCTGCCCAACAAGATCGGCTACCTGCTGGGGCTGAAGTCGAAGGACCTCGAAAAGGTCATCTACTACGAGAAGTACATCGTCATTCAGCCCGGTTCGGCGCGGCGGCTGGGCGTGGAAAAAGACCAGCTCCTCGACGAGGACGAGTATTACGAAATCCTCTACCAGATCCGCGAGGACAACAACCGCCTCGAAGACGACAACGAGGACAAGTTCATCGCCATGATCGGCGGGGAGGCCGTCGAGACGATGCTCGAGCGCCTCGAACTCGACTCCCTGGCGCAGAAGCTGCGCTACCAGGTCAAGACCGAGACGAGCCAGCAGCGCAAGGCCAAGGCGCTGAAGCGTCTCAACGTGGTCGAGGGCTTCCGCGAGGCCAACACGCGCCAGGTCAACAAGCCGGAGTGGATGATGCTGCGCGTGATTCCGGTGATTCCGCCGGAGCTGCGCCCGCTGGTGCCGCTCGACGGGGGCCGCTTTGCCACCAGCGACCTCAACGACCTGTACCGGCGCGTCATTATCCGCAACAATCGCCTCAAGCGCCTGATGGACATCAAGGCCCCGGAGGTCATCCTGCGCAACGAGAAGCGGATGCTCCAGGAGGCCGTCGATGCCCTCTTCGACAACGGGCGCAAGTCCAACAGCGTGCGCGGCAGCTCCAACCGCCCGCTCAAGAGCCTCAGCGACATGCTGAAAGGCAAGCAGGGGCGCTTCCGCCAGAACCTGCTGGGCAAGCGTGTGGACTACTCGGGCCGTTCGGTGATCGTCGTCGGGCCGGATCTGGAGTTGCACCAGTGCGGCCTGCCGAAGGACATGGCCGTCGAGCTGTTCAAGCCGCACATCGTGCGCAAGCTCATCGAGCGCGGCATCGTTAAGACCGTCAAGAGCGCCAAGAAGTACGTCGAACGGCGCACCGCGGAGGTGTGGGACATTTTGGAAAAGGCCATTCAGGGCCATCCCGTCTTGCTCAACCGCGCCCCGACGCTGCACCGCCTGGGCATTCAGGCGTTCCAGCCGGTCTTGACCGAGGGCAAGGCCATTCAGCTGCACCCGCTGGCCTGCACCGCCTACAACGCCGACTTCGACGGCGACCAGATGGCCGTGCACGTGCCGCTCAGCCACGAGGCGTGTCTGGAGAGCATGATCCTGATGCTGTCCTCGCACAACATCCTCAGTCCCGCGCACGGCGGCCCCATCGTGGCGCCCACGCAGGACATGATTCTCGGCCTCTACTACATGACGAAGGGGCGCGCGGGCGAAAAGGGCGAGGGCAAACGCTTTGCCAGCGTCGCGGAGGTGCGCCAGGCGCACGACCGGGGCATCGTCGAGACGCACGCCCGGGTCAAACTGCGCGACCCCGACGTTCCGGCTAACGCCCCCGCCGGCGAGACCCCCGACCTGATCGACACGACCGTCGGGCGCGTCCTCTTCAACGACATCGTGCCGGAGGGGGTCGGCTTCGTCAACGAGGTGCTGACCAAGAAAAACATGCGCCCGATCATCGGTCGCATCCTCAAGGAGAGCGGCTACAAGGAAACGGCCCGCTTCCTCGACGACATGAAGGACCTGGGCTTCGAGCGCTCGACCACGTCGGGCCTCACGTTCAGCCTGTCGGACATCGTCGTGCCCGATGAAAAAGAAGGCCTCGTCGAAGAAGCCACCGAGGAGGTCGAAGCCGCGCAGGGCAACTACGCGATGGGCTTCATCACCGACAACGAGCGCTACAACCAGGTCATCGACATCTGGACGCAGGTCAACAACCAGGTGTCCGACGCGCTGTACAACACGCTCAAAGAGCATAAGGAGGGGTTCAACGCCATTTACATGATGGCCGACAGCGGGGCGCGCGGTTCGCAGGAGCAGATTCGCCAGCTCGGCGGCATGCGCGGCCTGATGGCCAAGCCGCAGAAGAGCCTCGAAGGCTCCGCCGGCGAGATCATCGAGAACCCGATCCTGTCGAACTTCAAGGAGGGCCTCTCGGTGCAGGAGTACTTCATCTCCACGCACGGTGCGCGCAAGGGCCTGGCCGACACGGCGCTGAAGACCGCCGACGCCGGCTACCTCACGCGTCGCCTGGTGGACGTGGCCCAGGACGTGACGATTACCGAGGAGGACTGCGGCACGCTGCGCGGCATCAAGATCAGCGCGCTGAAGGACAACGAGGAGATCGTCGAGCCGCTGGGCGACCGCATCGTCGGGCGCGTGAGCGTGCATGACGTGTACGACCCGCTCTCCGACGAGCTGCTGGTCGCCGCCAACGCGTTGATTACCGAAGAAAAGGCTGCCGCCATCGCGGACACCTCCATCGATGCGGTCGAGATCCGCTCGGCCCTCACGTGCGAGGCGCGGCGCGGCGTCTGCGCGCTCTGCTACGGCGAAAACCTGGCGACCGACCGCATGGTCGAGGTCGGCGAGTCGGTCGGCGTCGTGGCGGCGCAGTCCATTGGCGAGCCGGGGACGCAGCTCACGCTGCGCACCTTCCACATGGGCGGATCGGCCAGCCGCGTTTCGGCCGAGTCCACCATTCAGACCAAGTTCGACGGCGAGGTCGAGTTCAATAACCTGCGCACCGTCGAGTACGATGACGGGGAAGGGCCGTCGGATATCGTCCTCAGCCGCCAAGGCGAGATGCGCATCCTGGACGACAACGGCCAGGAGGTAACCAGCTACGGCATTCCCTATGGCGCGGAGGTGCTCGTGGAGGACGGCGACACGGTCGACGAAGAGGCCGTGCTCGCTTCGTGGGACCCGTACAACTCGGTTATTCTCTCGGAGGCGACCGGCGAGGTGCGCTTCAACGACGTGATCGAGGGGACGACCTACCGCGAGGAGAGCGACGAGCAGACCGGCTACAAGGAGAAAGTCATCATCGAGAGCCGCGAGCGCACGCTCACTCCCGGCGTCATCGTGGAGATGGACGACGACGAGCGCGAGTTTCCGATGCCGGTGTCCGCCCGCATTCAGGTGGACGAGGGCGAGGCGGTGAAGGCCGGGCAGGTGCTGGCCAAGATCCCGCGCCAGACGGCCAAGACCAAGGACATCACCGGCGGCCTGCCGCGCGTGACCGAGCTCTTTGAGGCGCGCACGCCCGACGACCCGGCGGAGGTCAGCGAGATCGACGGCGTGGTGAGCTTCGGCGACCGCAAGCGCGGTTCGCAGGAGGTCATCGTCACCAGTCGCGACGGCAAGACCGAGAAGAGCTACATGGTCAGCCTTTCGAAGCACCTGCTGGTGCACGAGAACGACCTCGTCAGCGCCGGCGACCAGCTCTCCGACGGCCAGATCGCCCCGCACGACATTCTCTCGATCAAGGGGCCGCGTGCGGTGCAGGAGTACCTCGTCAACGAGATTCAGGAGGTGTACCGCCTGCAGGGGGTCGCCATCAACGACAAGCACATCGAGATCATCGTGCGCCAGATGATGGAGCGCGTCGAGATCACCGAGACCGGCGACACGAACCTGCTGGAGGAAGAGCAGGTCAACCGCTTCCGCCTCGCGGAGATCAACGACGACCTCTACGACAAATTCGTCGTCACCGACCCCGGCGAGGCGGACGTCAAGATCGGGGCGGTGGTCAGCCGGCGCGAGCTGCGCGACCTCAACCGCGAGATGAAGCGCCAGGACCTCGCCCAGGTCGAGGTGCGCGACGCGCGTCCCGCCGTCGGCGAGCCGGTGCTGCTGGGCATTACGAAGGCGGCGCTGGCGACCGACTCGTGGGTCTCGGCGGCCAGCTTTCAGGAGACGACGAAAGTCCTGACCAACACGGCCATCCGCGCGGAGGAAGACCCGTTGCAAGGCCTCAAGGAGAACGTCGTCGTCGGCCACCCGATTCCCGCCGGCACGGGCCAGCGCCAGTACCGCGACATCATGGTCGGCTCGAAGGGCGAGCTCGAGGAGATCCAAGCCGCTATCGGCGAGACCGACGGCGAAGAAGAAGAGGAAGGCGTGCCTGCCGGCGACGGTGCGGCGGCCGGAGACGGGACCTCGGGGGACGGGGCGGCGACCGTGGGCGGCGACGGAGCCGTGGGCAGCGACGGGGCCGTCGGGGGCGACGGCGCGGCCGAGGAAGCGGAAATTAGCTGA
PROTEIN sequence
Length: 1475
MAYGKTNDVEEDFSQLSVSLASPEDILERSHGEVLKPETINYRSFKPEKDGLFCEKIFGPVKDWECHCGKYKRIRYKGIICDRCGVEVTRKAVRRERMGHITLSVPVVHIWYFKTLPNKIGYLLGLKSKDLEKVIYYEKYIVIQPGSARRLGVEKDQLLDEDEYYEILYQIREDNNRLEDDNEDKFIAMIGGEAVETMLERLELDSLAQKLRYQVKTETSQQRKAKALKRLNVVEGFREANTRQVNKPEWMMLRVIPVIPPELRPLVPLDGGRFATSDLNDLYRRVIIRNNRLKRLMDIKAPEVILRNEKRMLQEAVDALFDNGRKSNSVRGSSNRPLKSLSDMLKGKQGRFRQNLLGKRVDYSGRSVIVVGPDLELHQCGLPKDMAVELFKPHIVRKLIERGIVKTVKSAKKYVERRTAEVWDILEKAIQGHPVLLNRAPTLHRLGIQAFQPVLTEGKAIQLHPLACTAYNADFDGDQMAVHVPLSHEACLESMILMLSSHNILSPAHGGPIVAPTQDMILGLYYMTKGRAGEKGEGKRFASVAEVRQAHDRGIVETHARVKLRDPDVPANAPAGETPDLIDTTVGRVLFNDIVPEGVGFVNEVLTKKNMRPIIGRILKESGYKETARFLDDMKDLGFERSTTSGLTFSLSDIVVPDEKEGLVEEATEEVEAAQGNYAMGFITDNERYNQVIDIWTQVNNQVSDALYNTLKEHKEGFNAIYMMADSGARGSQEQIRQLGGMRGLMAKPQKSLEGSAGEIIENPILSNFKEGLSVQEYFISTHGARKGLADTALKTADAGYLTRRLVDVAQDVTITEEDCGTLRGIKISALKDNEEIVEPLGDRIVGRVSVHDVYDPLSDELLVAANALITEEKAAAIADTSIDAVEIRSALTCEARRGVCALCYGENLATDRMVEVGESVGVVAAQSIGEPGTQLTLRTFHMGGSASRVSAESTIQTKFDGEVEFNNLRTVEYDDGEGPSDIVLSRQGEMRILDDNGQEVTSYGIPYGAEVLVEDGDTVDEEAVLASWDPYNSVILSEATGEVRFNDVIEGTTYREESDEQTGYKEKVIIESRERTLTPGVIVEMDDDEREFPMPVSARIQVDEGEAVKAGQVLAKIPRQTAKTKDITGGLPRVTELFEARTPDDPAEVSEIDGVVSFGDRKRGSQEVIVTSRDGKTEKSYMVSLSKHLLVHENDLVSAGDQLSDGQIAPHDILSIKGPRAVQEYLVNEIQEVYRLQGVAINDKHIEIIVRQMMERVEITETGDTNLLEEEQVNRFRLAEINDDLYDKFVVTDPGEADVKIGAVVSRRELRDLNREMKRQDLAQVEVRDARPAVGEPVLLGITKAALATDSWVSAASFQETTKVLTNTAIRAEEDPLQGLKENVVVGHPIPAGTGQRQYRDIMVGSKGELEEIQAAIGETDGEEEEEGVPAGDGAAAGDGTSGDGAATVGGDGAVGSDGAVGGDGAAEEAEIS*