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sw_4_scaffold_55_9

Organism: SW_4_Salinibacter_ruber_64_21

partial RP 39 / 55 BSCG 38 / 51 ASCG 6 / 38
Location: comp(6525..7034)

Top 3 Functional Annotations

Value Algorithm Source
rfaY; RNA polymerase ECF-type sigma factor similarity KEGG
DB: KEGG
  • Identity: 82.2
  • Coverage: 169.0
  • Bit_score: 291
  • Evalue 1.30e-76
rfaY; RNA polymerase ECF-type sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily id=24658472 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber similarity UNIREF
DB: UNIREF100
  • Identity: 82.4
  • Coverage: 170.0
  • Bit_score: 291
  • Evalue 4.70e-76
RNA polymerase ECF-type sigma factor {ECO:0000313|EMBL:ABC46204.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Sali similarity UNIPROT
DB: UniProtKB
  • Identity: 82.2
  • Coverage: 169.0
  • Bit_score: 291
  • Evalue 6.60e-76

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Taxonomy

Salinibacter ruber → Salinibacter → Bacteroidetes Order II. Incertae sedis → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 510
ATGCCTGATCGGGACGACGAGTTCATACAGCTGGTGCGCGAGAACGACGCTCGCCTCCGCAAAATCTGCCGTGTCTACGCAGACAGTGCGGCGGCGCAGCGCGACCTGTACCAGGACATCCTCGTGGAAGTCTGGCGCTCGTTTCCCTCCTTCGAGGGCGACGCCACCCCCAGCACCTGGCTCTATCGCGTGGCGCTCAACACAGCCTTGAGTCACGATCGCACGCAGGCGGTGCGGGAGGAGGCGACGCTCGACACAGACCATCCGGTGTGGACGGACGGCGTGCCTCGCCCCAGCGAGCGTCTCGACAAGCAAGACAAACTCGACCGGCTGTATGACGCCATCGACCGGCTCAACGAGGTCGACAAGGCGCTCGTCATGATGTACCTCGACGAGAAGAGCTACCGGGAGATGGCCGACGTGCTCGGCATCAGCGAAAACTACGTGGGCGTGAAGCTGCATCGGATCAAGAACAAACTGGCCTCCTGGCTGGAGGAAACGCCGGCATGA
PROTEIN sequence
Length: 170
MPDRDDEFIQLVRENDARLRKICRVYADSAAAQRDLYQDILVEVWRSFPSFEGDATPSTWLYRVALNTALSHDRTQAVREEATLDTDHPVWTDGVPRPSERLDKQDKLDRLYDAIDRLNEVDKALVMMYLDEKSYREMADVLGISENYVGVKLHRIKNKLASWLEETPA*