ggKbase home page

sw_4_scaffold_875_7

Organism: SW_4_Salinibacter_ruber_64_21

partial RP 39 / 55 BSCG 38 / 51 ASCG 6 / 38
Location: comp(5326..5535)

Top 3 Functional Annotations

Value Algorithm Source
cspC; cold-shock DNA-binding protein similarity KEGG
DB: KEGG
  • Identity: 94.2
  • Coverage: 69.0
  • Bit_score: 144
  • Evalue 1.40e-32
cspC; cold-shock DNA-binding protein; K03704 cold shock protein (beta-ribbon, CspA family) id=24658885 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber similarity UNIREF
DB: UNIREF100
  • Identity: 94.3
  • Coverage: 70.0
  • Bit_score: 144
  • Evalue 5.00e-32
'Cold-shock' DNA-binding domain {ECO:0000313|EMBL:CBH24080.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibac similarity UNIPROT
DB: UniProtKB
  • Identity: 94.2
  • Coverage: 69.0
  • Bit_score: 144
  • Evalue 6.90e-32

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Salinibacter ruber → Salinibacter → Bacteroidetes Order II. Incertae sedis → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 210
ATGGAGACAGGAACCGTCAAGTGGTTCAGTCCGGCCGAAGGATATGGATTCGTTGAACCTGACAATGGGGAAGACGATGTTTTCCTCCACCACAGTGAGGTACCCGACGAAGACCTGGAAGAAGGCGATCGCCTTGAGTTTGAAATCGAGGAGACCGAGAAGGGACTGAACGCTACCAACATTCAGCCCATTACTGAGCCCGAGTGGTAA
PROTEIN sequence
Length: 70
METGTVKWFSPAEGYGFVEPDNGEDDVFLHHSEVPDEDLEEGDRLEFEIEETEKGLNATNIQPITEPEW*