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sw_4_scaffold_125_4

Organism: SW_4_Salinibacter_ruber_64_69

partial RP 45 / 55 MC: 2 BSCG 44 / 51 ASCG 5 / 38 MC: 1
Location: comp(3586..4572)

Top 3 Functional Annotations

Value Algorithm Source
rpoA; DNA-directed RNA polymerase subunit alpha; K03040 DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] id=24658983 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber similarity UNIREF
DB: UNIREF100
  • Identity: 91.8
  • Coverage: 329.0
  • Bit_score: 600
  • Evalue 1.20e-168
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059, ECO:0000313|EMBL: similarity UNIPROT
DB: UniProtKB
  • Identity: 91.8
  • Coverage: 328.0
  • Bit_score: 600
  • Evalue 1.70e-168
rpoA; DNA-directed RNA polymerase subunit alpha similarity KEGG
DB: KEGG
  • Identity: 91.8
  • Coverage: 328.0
  • Bit_score: 600
  • Evalue 3.40e-169

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Taxonomy

Salinibacter ruber → Salinibacter → Bacteroidetes Order II. Incertae sedis → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 987
ATGAGTAACCACGGGCTTCAGATGCCAGACGGCGTCCAAGGCGAGGACGTCTCCGATTCCGAAGGTCAATTTGTCATGGGTCCGCTTGAGCGGGGCTACGGAGTAACCATCGGCAATGCCCTTCGCCGCGTGCTACTGTCGTCCCTCCGCGGACTCGCCATCACCGCCGTGAAGATTGACGGCGTCCAGCACGAGTTCTCCACCATTCCCGGGGTCACGGAGGACGTGTCCGACATCATTTTGAATCTCAAAGAGGTACGGCTCCGCGCCGACGAGATGCGGGAGGGGCACTTGCACCTCAACCTCGAAGGGCCTGGAAACTGGACGGCCGAGGACATCGGAGAGTCCACGGCGGAGTACGACGTGCTGAACCCGGGCCAGCACATTGCCACGCTGGCCGAGGATGCCGTCGTGAACGTCGACCTGCGAGTCGGACACGGGCGCGGCTACGTCCCGTCCGAGGAGAACAAGAATGAGGATGACCCGATCGGGGTGATTGCGGTCGACTCCATCTTCACCCCCATCAAGAACGTCAAGTACGAGGTCAACCCCACCCGCGTGGGGCAAAAGATCGACTACGAAGAGCTCGTCCTGGACGTGGAAACCGACGGCTCGCTCACGCCGGAGGAAGCCATCACGGAGGCGGCCTCGATCCTGCGCGACCACGTGAGCTTCTTCATCCAGCTCGAGGAGGAGCCCGAGCCGGTGGTCGAGGAGCAGGAGGTCGACGAAGAGGTCAAGCGCATTCGCGAGCTGCTCGCCCAGCCGGTCGATGAGCTAGACCTGTCGGTGCGCTCTCACAACTGCCTGAAGGCGGCCAACATCAAGACGATCGGGGATCTGGTTCGCCGTGAATCGGACGAGATGCTCAAGTTCCGAAACTTCGGCCGGAAGTCGCTGCAGGAGCTCCAAGAGGTGCTCGACGAGCGGGGCCTCCACTTCGGAATGAACGTGGAGGAATATGTCGAAGAGAAGAAGGCCTCTTAA
PROTEIN sequence
Length: 329
MSNHGLQMPDGVQGEDVSDSEGQFVMGPLERGYGVTIGNALRRVLLSSLRGLAITAVKIDGVQHEFSTIPGVTEDVSDIILNLKEVRLRADEMREGHLHLNLEGPGNWTAEDIGESTAEYDVLNPGQHIATLAEDAVVNVDLRVGHGRGYVPSEENKNEDDPIGVIAVDSIFTPIKNVKYEVNPTRVGQKIDYEELVLDVETDGSLTPEEAITEAASILRDHVSFFIQLEEEPEPVVEEQEVDEEVKRIRELLAQPVDELDLSVRSHNCLKAANIKTIGDLVRRESDEMLKFRNFGRKSLQELQEVLDERGLHFGMNVEEYVEEKKAS*