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sw_4_scaffold_2603_3

Organism: SW_4_Salinibacter_ruber_64_69

partial RP 45 / 55 MC: 2 BSCG 44 / 51 ASCG 5 / 38 MC: 1
Location: comp(4109..4663)

Top 3 Functional Annotations

Value Algorithm Source
rpoD; RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 92.9
  • Coverage: 184.0
  • Bit_score: 344
  • Evalue 1.90e-92
rpoD; RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily id=24658079 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber similarity UNIREF
DB: UNIREF100
  • Identity: 93.0
  • Coverage: 185.0
  • Bit_score: 344
  • Evalue 6.60e-92
RNA polymerase sigma factor {ECO:0000313|EMBL:CBH25282.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter similarity UNIPROT
DB: UniProtKB
  • Identity: 92.9
  • Coverage: 184.0
  • Bit_score: 344
  • Evalue 9.30e-92

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Taxonomy

Salinibacter ruber → Salinibacter → Bacteroidetes Order II. Incertae sedis → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 555
ATGCCTGAGACAGCGTTCGATCCGGACCGCGTTCGTGAGGCCCAAAACGGCGATGAGCAGGCCCGGAATGGGCTGCTCCGTCGGCTGGAGCCCATCCTCCGGGGCTACTTCATCAAACGCATCGGGGCCGAGACCGACGTAGACGATCTGGTGCAGAACACGCTCGTGCGCATTCACGAGAGCCTCGACGACCTCAAGAAGCCAGGCAGCCTGAAGTCGTTCGCCATGAAGGCGGCACTGTTTGAGTTGCAGGATTACTACCGGGGGCGCTACGACATGAAAGAGAGCCTGCGCGATCCTGATCTGCCCCTGGGACGGTCGACGGAGCCGGAGGATCGGAGTGCCCACGTGGACGTCGAAAAAGCGCTTGAGGCCCTAACCCCCAAGGCGCGGCGCATTATGGAGCTCCGCGAGTACGGGTACCTCTACCGCGAAATCGCTCAGATGCTCGATACCACCGAAGCGGCGGTCAAGATGCAGGTCAAGCGAGCCTTCGAAACCATGAAAGAGGCGCTGAGTGCCCTGCTGATTCTCCTCTGGTTTTTTGGACTATAG
PROTEIN sequence
Length: 185
MPETAFDPDRVREAQNGDEQARNGLLRRLEPILRGYFIKRIGAETDVDDLVQNTLVRIHESLDDLKKPGSLKSFAMKAALFELQDYYRGRYDMKESLRDPDLPLGRSTEPEDRSAHVDVEKALEALTPKARRIMELREYGYLYREIAQMLDTTEAAVKMQVKRAFETMKEALSALLILLWFFGL*