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sw_4_scaffold_1033_6

Organism: SW_4_Halococcus_67_50

near complete RP 24 / 55 MC: 3 BSCG 20 / 51 MC: 2 ASCG 31 / 38 MC: 3
Location: comp(5590..6213)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator TrmB n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MHJ4_9EURY similarity UNIREF
DB: UNIREF100
  • Identity: 68.0
  • Coverage: 206.0
  • Bit_score: 268
  • Evalue 6.80e-69
Transcriptional regulator TrmB {ECO:0000313|EMBL:EMA45202.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharol similarity UNIPROT
DB: UniProtKB
  • Identity: 68.0
  • Coverage: 206.0
  • Bit_score: 268
  • Evalue 9.50e-69
transcriptional regulator, TrmB similarity KEGG
DB: KEGG
  • Identity: 42.9
  • Coverage: 205.0
  • Bit_score: 129
  • Evalue 1.40e-27

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Taxonomy

Halococcus saccharolyticus → Halococcus → Halobacteriales → Halobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 624
ATGGCCGACGAGGATACGTCCACCGACGCGACCGACGAGGAGGGGGCAGTCGACACGGACGACGTCCAGCCCGCCGACGTGCGCGCCGAACTCGACCGCCAGCGATCGGGAGGTGCGACGACCGGCGGGACGAGCCCGGCGAGCGAGTCGCGCAGCGAGGGCACCGTCGAGTTCGACGAGGGGATCGTGGAACTGCTCTCGGCGGCGCTCGACACCGATCGGGCCGCGCGGGTGTACGTCGCGGTCCGGCGTCGCTCGTCGGCGACCCCCGAGAAGGTCGCAGCGGACACCGGGCTGTATCCCGATTCGGTCCGCGAGATGCTCGCCGACCTCCGCGAGGAGGGCGTGGTCGAGCGCCGTACCCACACCGGGGGGGATGCGGAGTTCGAGTACACGGCAATCGCGCCGAGCGAACTCCTCGACGTGATGATCGATCGGGTCCGCGACGAGTTCGACGCGAGGCTCGGCCTCGATCGGCTCCCGGACGAACGCTCCGAGCCGACCCGTCGGACCCCGCGGAGCGACCCCGTGACGATCACCGTCGAGGACGCCAGCGAAAGTGCCGAAACGACGGACGACGGATCGTCGGCCAGCGACGAGACAGCCAACGGCTCAGGGGAGTAG
PROTEIN sequence
Length: 208
MADEDTSTDATDEEGAVDTDDVQPADVRAELDRQRSGGATTGGTSPASESRSEGTVEFDEGIVELLSAALDTDRAARVYVAVRRRSSATPEKVAADTGLYPDSVREMLADLREEGVVERRTHTGGDAEFEYTAIAPSELLDVMIDRVRDEFDARLGLDRLPDERSEPTRRTPRSDPVTITVEDASESAETTDDGSSASDETANGSGE*