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sw_4_scaffold_271_12

Organism: SW_4_Halococcus_67_50

near complete RP 24 / 55 MC: 3 BSCG 20 / 51 MC: 2 ASCG 31 / 38 MC: 3
Location: comp(8397..8753)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit F {ECO:0000313|EMBL:EMA49057.1}; EC=2.7.7.6 {ECO:0000313|EMBL:EMA49057.1};; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacter similarity UNIPROT
DB: UniProtKB
  • Identity: 91.5
  • Coverage: 118.0
  • Bit_score: 217
  • Evalue 8.40e-54
rpoF; DNA-directed RNA polymerase subunit F (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 76.3
  • Coverage: 118.0
  • Bit_score: 180
  • Evalue 3.00e-43
DNA-directed RNA polymerase subunit F n=2 Tax=Halococcus RepID=M0MR97_9EURY similarity UNIREF
DB: UNIREF100
  • Identity: 91.5
  • Coverage: 118.0
  • Bit_score: 217
  • Evalue 6.00e-54

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Taxonomy

Halococcus salifodinae → Halococcus → Halobacteriales → Halobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 357
ATGACGATCTTCAAGGAGCGCCTCGACGAGGAGTACCTCACGCTCGCCGAGACCAAGGAGCTGCTCGCCGACGTCGAAGCCGAGCACGCCGCCGACGAGGACCGCGAGATGCCCTACGAGCTCGCGCGCGCCATCGAGCACGTCAATCGGTTCGCCGAACTCGCCCCCGAGGAGTCCCGCGAGTTCGTGGCCGAGCTCCGCGAGCACGAGAAGGTCGACGAGCCGACCGCCTTCAAGATCGCGGACCTCAAACCCACCAATCGCGACGAACTCCGCGCGATCTACGCCCAGGAGCGCTTCTCGCTGTCGGGCGACGAGCTCGACGAGGTTCTCGACATCGTGGCGAAACACGTCTGA
PROTEIN sequence
Length: 119
MTIFKERLDEEYLTLAETKELLADVEAEHAADEDREMPYELARAIEHVNRFAELAPEESREFVAELREHEKVDEPTAFKIADLKPTNRDELRAIYAQERFSLSGDELDEVLDIVAKHV*