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sw_4_scaffold_282_2

Organism: SW_4_Halococcus_67_50

near complete RP 24 / 55 MC: 3 BSCG 20 / 51 MC: 2 ASCG 31 / 38 MC: 3
Location: comp(1588..3147)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit B {ECO:0000313|EMBL:EMA49911.1}; EC=2.7.7.6 {ECO:0000313|EMBL:EMA49911.1};; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacter similarity UNIPROT
DB: UniProtKB
  • Identity: 98.7
  • Coverage: 519.0
  • Bit_score: 1010
  • Evalue 8.50e-292
DNA-directed RNA polymerase subunit beta'' (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 89.4
  • Coverage: 521.0
  • Bit_score: 933
  • Evalue 2.70e-269
DNA-directed RNA polymerase subunit B n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MWD7_9EURY similarity UNIREF
DB: UNIREF100
  • Identity: 98.7
  • Coverage: 519.0
  • Bit_score: 1010
  • Evalue 6.00e-292

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Taxonomy

Halococcus salifodinae → Halococcus → Halobacteriales → Halobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 1560
ATGAACAGGCAAGACAGGCGTTCGATCTCGCGGGAGTACTTCTCCCGCGAGCGACTCGCAGAGCATCATTTCCGGTCGTTCAACTCGTTTCTCGGCCGCGGAATGCAGCAGGTGGTCGACGAGAAGGAGACGATCGACACCGACATCGGCGACAAGGAGGGCGAGGAGCCCGTCTTCGTCGAACTGGGCGACGTGCGGGTCGTCACGCCCCGGGTGCGAGAAGCCGACGGCAGCGAGGAACGGCTCTACCCCCAGGAAGCCAGGCTCCGGAACATCACCTACTCCGCGCCCGTATTCATGGAGATGGCGGTCGTCGTCGGTGGCGAAGAAGAGGAAGAGCGCGTCGTCGACACCGCCGAGACCCAGATCGGGCGGCTCCCGATCATGGTCGGCTCCGACGAGTGCAACATCGCCGGCGCGACCGACGAGGAGCTGATCGAGCTCGGCGAGGACCCCGCCGACCCAGGCGGGTACTTCATCGTCAATGGCTCCGAGCGCGTGCTGATGACCAGCGAGGACCTGGCACCCAACAAGATCCTCGCGGAGTACGACTCGAAGTACGGCGACGAGATCCAGGTCGCCAAAACGTTCAGCCAGCGTCGCGGATACCGTGCCCTCGTGCTGTGCGAGCGCAATCGTGAGGGACTGCTCGAAGTCTCGTTCCCGAGCGTCTCGGGCAGCATCAACTTCGTGACTCTCGTTCGGGCGCTCGCGCTCGAATCCGACGAGGAGATCGTGCACCGGGTTTCCGACGACCCCGAGATCGTGAAGTTCATGCTCGAAAACCTCGAGGCCGCGGAGGTCCAGACCGAGGAGGCCGCGATCGAGGACCTCGGCGAACGTGTCGCGTCGGGCCAAGGCAAGAACTACCAGTTGAAGCGCGCGAACTACGTCATCGACCGGTATCTCCTGCCCCACCTCCACGAGGAGGGCGTTCCCGACGAGGAGACCCGGATCAACAAGGCGTTCTACCTCTGTCGAATGGCCGAGGCGTGTTTCGAACTCGCGCTCGGACGGCGTGAGTCCGACGACAAGGACCACTACGCCAACAAGCGCCTCAAGGTCTCCGGTGATCTGATGACCGACCTGTTCCGCACAGCCCTGAACAAGCTCGCACGCGACGTGAAGTACCAGCTGGAGCGCGCGAACATGCGGAACCGACAGTTGTCGGTCAACACTGTCGTCCGCTCGGACGTGCTGACCGAGCGGCTCGAACACCCGATCGCCACCGGCAACTGGGTTGGCGGCCGTTCGGGTGTGAGCCAGCTCGTGGACCGGACCGATTTCATGGGCGTGCTCTCCCATCTCCGGCGGCTCCGCTCGCCACTGTCGCGGAGCCAGCCCCACTTCGAGGCGCGGGACCTCCACGCCACCCAGTGGGGGCGGATCTGTCCCTCCGAGACGCCCGAAGGCCCGAACTGCGGGCTCGTGAAGAACTTCGCGCAGGCGATGGAGCTGTCCCAGGACGTCGAGGACGAACAGCAACTCAAACGAGAGCTGGCGTCGATGGGTGTCGAGGGGATCCCCGGCATCGAGGGCGTCACCCCGAGCGCTGATTGA
PROTEIN sequence
Length: 520
MNRQDRRSISREYFSRERLAEHHFRSFNSFLGRGMQQVVDEKETIDTDIGDKEGEEPVFVELGDVRVVTPRVREADGSEERLYPQEARLRNITYSAPVFMEMAVVVGGEEEEERVVDTAETQIGRLPIMVGSDECNIAGATDEELIELGEDPADPGGYFIVNGSERVLMTSEDLAPNKILAEYDSKYGDEIQVAKTFSQRRGYRALVLCERNREGLLEVSFPSVSGSINFVTLVRALALESDEEIVHRVSDDPEIVKFMLENLEAAEVQTEEAAIEDLGERVASGQGKNYQLKRANYVIDRYLLPHLHEEGVPDEETRINKAFYLCRMAEACFELALGRRESDDKDHYANKRLKVSGDLMTDLFRTALNKLARDVKYQLERANMRNRQLSVNTVVRSDVLTERLEHPIATGNWVGGRSGVSQLVDRTDFMGVLSHLRRLRSPLSRSQPHFEARDLHATQWGRICPSETPEGPNCGLVKNFAQAMELSQDVEDEQQLKRELASMGVEGIPGIEGVTPSAD*