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sw_4_scaffold_375_5

Organism: SW_4_Halococcus_67_50

near complete RP 24 / 55 MC: 3 BSCG 20 / 51 MC: 2 ASCG 31 / 38 MC: 3
Location: comp(1614..2276)

Top 3 Functional Annotations

Value Algorithm Source
Bacterio-opsin activator HTH domain-containing protein n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N0J7_9EURY similarity UNIREF
DB: UNIREF100
  • Identity: 75.3
  • Coverage: 215.0
  • Bit_score: 335
  • Evalue 4.80e-89
Bacterio-opsin activator HTH domain-containing protein {ECO:0000313|EMBL:EMA51401.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" sour similarity UNIPROT
DB: UniProtKB
  • Identity: 75.3
  • Coverage: 215.0
  • Bit_score: 335
  • Evalue 6.70e-89
putative DNA binding protein similarity KEGG
DB: KEGG
  • Identity: 35.8
  • Coverage: 218.0
  • Bit_score: 136
  • Evalue 9.20e-30

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Taxonomy

Halococcus thailandensis → Halococcus → Halobacteriales → Halobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 663
ATGAGCGTCATCGCCAGCCTCTCGATCGATGCCGACGAGTTCGTTCTCGGCGAGGTCCTCGCCGCCACTACCACCCGCATCGAACTCACCCAGTTCGTCCCCGTCGACAACCAGCTCGTCCCCTACTTCTGGAAGGAACACGACGGTGACGACGAAGCCTTCGAGCAAAGCGTTCGTGGCCATTCCGCCGTCGCGGCTCTCAGCAACCTCGACGGGAAGGTCAACAGCCACCTCTACAAGATCGAGTGGACCAGCGAGGTCGACGGGTTTCTCAGTGCGCTCCGCGACCAGAACGTCCTGATCGAGGAGGGCACCACCACCGACGGCGAGTCGTGGCTCTTCCAACTCCGTGCGCTGGACCAAAAGGAACTTTCGGCGTTTCAGGACAACTGCTCCACTCGCGACGTCCCGCTCGATATCCGCCGCGTGGTCCACGACCCCGATAGCTCCGACAACCCCCGCTCGCTCGTCGGTGTCACACCCAAGCAGCAGGAGGCCCTTACGCTCGCGTTCGACCGCGGGTATTTCAGCGTGCCGCGCGATATCTCCGCCGACGACCTCGGCAAGGAACTCGACATTAGCGGCCAGGCGTTCTCCCGCCGCCTCCAACGCGGCCACTACGGCGTCCTCACCAACCTTCTCTCCGGCCTCGTCACTCAGTAA
PROTEIN sequence
Length: 221
MSVIASLSIDADEFVLGEVLAATTTRIELTQFVPVDNQLVPYFWKEHDGDDEAFEQSVRGHSAVAALSNLDGKVNSHLYKIEWTSEVDGFLSALRDQNVLIEEGTTTDGESWLFQLRALDQKELSAFQDNCSTRDVPLDIRRVVHDPDSSDNPRSLVGVTPKQQEALTLAFDRGYFSVPRDISADDLGKELDISGQAFSRRLQRGHYGVLTNLLSGLVTQ*