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sw_4_scaffold_615_4

Organism: SW_4_Halococcus_67_50

near complete RP 24 / 55 MC: 3 BSCG 20 / 51 MC: 2 ASCG 31 / 38 MC: 3
Location: comp(1263..1718)

Top 3 Functional Annotations

Value Algorithm Source
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Putative toxin VapC {ECO:0000256|HAMAP-Rule:MF_ similarity UNIPROT
DB: UniProtKB
  • Identity: 59.2
  • Coverage: 147.0
  • Bit_score: 170
  • Evalue 1.50e-39
Ribonuclease VapC n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N368_9EURY similarity UNIREF
DB: UNIREF100
  • Identity: 59.2
  • Coverage: 147.0
  • Bit_score: 170
  • Evalue 1.10e-39
PilT protein domain protein similarity KEGG
DB: KEGG
  • Identity: 58.5
  • Coverage: 142.0
  • Bit_score: 163
  • Evalue 4.80e-38

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Taxonomy

Halococcus salifodinae → Halococcus → Halobacteriales → Halobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 456
ATGACCGAAAGCGTCCGGGCGAATCGTCCGCTGTTCATCGATACGAGCGCGTTCTTCGCACAACTCAACGATCGCGACGAGAATTACGACCGTGCGGGAGCCGTTTTCGCAGCCATCGGAGCGGGGAACCTCGCTCACCGGCCGCTCTACACCAGCGGGTACGTTCTTTCGGAACTCGCGACACTCACGCTGCGCAAAGCGGACCATGCCGCAGCTATTGAAGCACTCGGTCGCGTAGGTAGCTCACCGGACGTGACGGTGCTCCATCCCGATGCCGCGGCATTCGCGGACGCCCGCCGCGCGTTCGAGCGGTACGACGACCACCAGATCTCCTTTGTCGATCACACGACCGGCGTGCTCGCCCGCGCCCACGATATCGAACATGTGTTCGCGTTCGACGGCGACTTTCGAACGCTCGGGTTCACGGTCGTTCCCGTGGACACCGATGAACCATGA
PROTEIN sequence
Length: 152
MTESVRANRPLFIDTSAFFAQLNDRDENYDRAGAVFAAIGAGNLAHRPLYTSGYVLSELATLTLRKADHAAAIEALGRVGSSPDVTVLHPDAAAFADARRAFERYDDHQISFVDHTTGVLARAHDIEHVFAFDGDFRTLGFTVVPVDTDEP*