ggKbase home page

You do not have permission to do that.

Please email help@ggkbase.berkeley.edu for help.

sw_4_scaffold_1205_3

Organism: SW_4_Halosimplex_carlsbadense_69_24

partial RP 29 / 55 MC: 3 BSCG 17 / 51 ASCG 19 / 38
Location: comp(3671..5467)

Top 3 Functional Annotations

Value Algorithm Source
Uncharacterized protein n=1 Tax=Haloarcula marismortui (strain ATCC 43049 / DSM 3752 / JCM 8966 / VKM B-1809) RepID=Q5UXD7_HALMA similarity UNIREF
DB: UNIREF100
  • Identity: 44.0
  • Coverage: 596.0
  • Bit_score: 525
  • Evalue 8.90e-146
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 44.0
  • Coverage: 596.0
  • Bit_score: 524
  • Evalue 3.30e-146
Uncharacterized protein {ECO:0000313|EMBL:AAV48066.1}; TaxID=272569 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula marismortui (stra similarity UNIPROT
DB: UniProtKB
  • Identity: 44.0
  • Coverage: 596.0
  • Bit_score: 524
  • Evalue 1.60e-145

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Haloarcula marismortui → Haloarcula → Halobacteriales → Halobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 1797
GTGCTCAACGACGGGAACGTCACCAGCGGGTCGGTTTCGAACCCGCAGCTCGAACAGCAGGTCACGACCGCGCGTGCGCTGAAAGCGCGGTTCGAGGAGAGCGATGCCCCGGTGAGCGTCTCGACCAACGAGCAGGCGGTCGCGACCCTGCCCGACGGGTCGAGCGCGCCCCTGCAGTTTCGCCTGACAGTCGACGGGGACGCCGACCCCGGCCGGTACGCGCTGCCGCTGAACGTCACGTACAACTACACCGCGTCGGTCGACCCACAGACCGGCGAGACCAACCGCACGACGACCGACGAGACGTTCGACGTCACGCTCGTCGTCGAGGAGACCCCCCAGTTTTCGGTGACCGAGGTCGACTCGAACGCCCGCACCGGCGCGACCGGCACGGTCGCGGTGACGCTACGCAACACAGGGTCCGAACCCGCGCGCAACGCGACCGTCGCGCTCGCCTCGGGGAACGGCGACCTCACGGTCGGGGGCACGGCCAGTTCCAGTCGGTTCGTCGACGGTCGGTGGGACCCCGGCGAGACCAGAACCGTCAGCTACCGCGTACGGGCTGCGCCCGCGGCGGGCGAGCAGCGCTACGCGCTGGACGCCACGGTCACCTACGAGAACAGCGACGGGGTGACCCGCCAGTCCCGATCCGTCTCGCTGGGCGTGACGCCCGACCCCGAGCAGACGTTCTCGGTGGTCGAGACCGACCACGCCGTCCGCGTCGGCGACGAGGGGCAGGTCGCCGTGACCCTGCGCAACGAGGGGCCGACCGCGGCCCGCGACGCGACGGTGACCGTCCAGTCGGGCACGAGCAACGTCGTCTTCGGCGAGTCGGCCTCGACCAGCCGGTACGTCGGGTCGTGGGCGCCCAACGAGACGCGGACGGTGCTGGTCAACGCCACCGCCGTCCCCGACGCGGAGACGCGCAACTACTCGCTGCAGGCGACGGTCGCCTACGAGGACGGCGAGGGCGACCCCGGGCAGTCCTCGACGCTCGGGTTCGGCCTCCGGCCCGGCCCCGAGCGCTCGGCAGCGTTCGAGGCCAGCGACGTCTCCTCGACGCTCCGGGTCGGCGAGGAGGGCGAACTCACCGGCACGATCACCAACACCGGCGAGGAGCGGGCCACGAACCTGGTCGTCGTCTTCGAGACCCGGAGCGAGAGCGTCTCCCCGCTGGAGCGGGAGTACTCGGTCGGGTCGCTCGACCCCAACGAGTCGGCGACGTTCGCGTTCGACGTCGAGGTGACGGGCTCGGCCAATCCCGGGCCGCGCCAGTTCACGCTCCGGCCCACCTATCGCGACGACGACGACCGGCAGCGACAGGGCGAGAGTTTCGACGTCCGCGAGCGGGTCCGCCCCCAGCGCGATGTCTTCGACGTGGACGTCGCCAACGACACCGTCGCCCGCGGGTCGACGACGCTGCTCGAAGTCTCGGTCACGAACACGCGCAACGAGACCCTCGAATCGGTCTCGGCGGCGATGTTCGCCGACGACCCCATCAGCGTCGACGACGGCGACGCGTTCGCCGACAGCATCGGGTCCGGCGAGACACGGACGCTCACGTTCGAGGTCAGCGCCGACTCGGGCGCGATCGCCAAGCAGTACCCCGTCGAACTGGACTTCCAGTACGACGAGGCCGACGGCGACACGCAGCTGTCGGGCGGGTACAACGTCGGCGTCTCCGTCACGCAACCGGCGGACGACGACGGCGATGGGCCGCCGCTCGCGCTCATCGGTGCCGGGGTCGTCGTCCTCGTGCTGGTGGGGGTCGGCCTCTATTACCGGTACGGCAGGTGA
PROTEIN sequence
Length: 599
VLNDGNVTSGSVSNPQLEQQVTTARALKARFEESDAPVSVSTNEQAVATLPDGSSAPLQFRLTVDGDADPGRYALPLNVTYNYTASVDPQTGETNRTTTDETFDVTLVVEETPQFSVTEVDSNARTGATGTVAVTLRNTGSEPARNATVALASGNGDLTVGGTASSSRFVDGRWDPGETRTVSYRVRAAPAAGEQRYALDATVTYENSDGVTRQSRSVSLGVTPDPEQTFSVVETDHAVRVGDEGQVAVTLRNEGPTAARDATVTVQSGTSNVVFGESASTSRYVGSWAPNETRTVLVNATAVPDAETRNYSLQATVAYEDGEGDPGQSSTLGFGLRPGPERSAAFEASDVSSTLRVGEEGELTGTITNTGEERATNLVVVFETRSESVSPLEREYSVGSLDPNESATFAFDVEVTGSANPGPRQFTLRPTYRDDDDRQRQGESFDVRERVRPQRDVFDVDVANDTVARGSTTLLEVSVTNTRNETLESVSAAMFADDPISVDDGDAFADSIGSGETRTLTFEVSADSGAIAKQYPVELDFQYDEADGDTQLSGGYNVGVSVTQPADDDGDGPPLALIGAGVVVLVLVGVGLYYRYGR*