ggKbase home page
This organism can only be binned in the context of its binning project GWA2. Please contact the project owner (jbanfield@berkeley.edu) to become a member and gain access.

sw_4_scaffold_12230_3

Organism: SW_4_Halosimplex_carlsbadense_69_24

partial RP 29 / 55 MC: 3 BSCG 17 / 51 ASCG 19 / 38
Location: comp(1820..2539)

Top 3 Functional Annotations

Value Algorithm Source
Putative uncharacterized protein n=1 Tax=Halobacterium sp. DL1 RepID=G4IDC0_9EURY similarity UNIREF
DB: UNIREF100
  • Identity: 53.7
  • Coverage: 203.0
  • Bit_score: 219
  • Evalue 4.20e-54
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 48.6
  • Coverage: 216.0
  • Bit_score: 201
  • Evalue 2.50e-49

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Halobacterium sp. DL1 → Halobacterium → Halobacteriales → Halobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 720
ATGACGGACTCATCCGCGGACAGCACGGGAACGGTGCTCGTGATGAACGCCCGGAGCGGCACCGGCGACCACGGACAGGCGGTCCGCGAACGCGCGGCCATCCTGGGGTACGACCTCGTCGAGACCGAGCGGGCGGAACACGCCGTCGAACTGGCGCGGGCGGCCGCCGACGAGGGCGCCGACGAGATCGTCGCGGTCGGGGGCGACGGGACGGTCAACGAGGTGGTCCGCGGCATCGACGCGGCCGACAGCCTGGATGACGTGACGGTGGGGGTCGTCCCGGCCGGGACCGGGAACGACTTCGCGAGCAACGTCGGCATCGCCGACATCGACGACGGTTTCCGGGCCGTCGCGGAGGGGCGGCGGCGCCGGATCGACGTCGGATTCGCCGACGGGCGCCCGTTCGTCAACTCCTGTCTCGCGGGCATCAAGGCCGAGGCCAGCGAGGCGACGTCGGCCGAGCTGAAATCGAAGTACGGTGTCCTCGCGTACGTCCTCCAGACCGTGGAAGTAGCCCCGGAGTTCACCGGGGTCGAACTGGCGGCCGCGACCGTCGATGGGGGCCGGCGCGAGACGGTCTGGGCGGGCGAGGCCGTCTTCGTTCTCGTCGGGAACGCGAGCGGCACCAGGTCCCGTCGCTCGAACTGCGCGTCCGGGACGGGGAGCCGGCCAGTTTCAGCCTGGACGGCGAGATCGTCCACGCGCGGTCGCTGGAACTGA
PROTEIN sequence
Length: 240
MTDSSADSTGTVLVMNARSGTGDHGQAVRERAAILGYDLVETERAEHAVELARAAADEGADEIVAVGGDGTVNEVVRGIDAADSLDDVTVGVVPAGTGNDFASNVGIADIDDGFRAVAEGRRRRIDVGFADGRPFVNSCLAGIKAEASEATSAELKSKYGVLAYVLQTVEVAPEFTGVELAAATVDGGRRETVWAGEAVFVLVGNASGTRSRRSNCASGTGSRPVSAWTARSSTRGRWN*