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sw_4_scaffold_1294_3

Organism: SW_4_Halosimplex_carlsbadense_69_24

partial RP 29 / 55 MC: 3 BSCG 17 / 51 ASCG 19 / 38
Location: 959..1930

Top 3 Functional Annotations

Value Algorithm Source
Transcription initiation factor IIB n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CKD8_9EURY similarity UNIREF
DB: UNIREF100
  • Identity: 83.3
  • Coverage: 329.0
  • Bit_score: 536
  • Evalue 1.60e-149
Transcription initiation factor IIB {ECO:0000256|HAMAP-Rule:MF_00383}; Short=TFIIB {ECO:0000256|HAMAP-Rule:MF_00383};; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halo similarity UNIPROT
DB: UniProtKB
  • Identity: 83.3
  • Coverage: 329.0
  • Bit_score: 536
  • Evalue 2.20e-149
transcription factor TFIIB cyclin-related protein similarity KEGG
DB: KEGG
  • Identity: 64.2
  • Coverage: 321.0
  • Bit_score: 422
  • Evalue 1.20e-115

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Taxonomy

Halosimplex carlsbadense → Halosimplex → Halobacteriales → Halobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 972
ATGACAAGCACTGACCGGACCATACGGACGAGGACGAGCGGGTCGATCGAGCGCGAGGAGTCGACCGAGCGGACCGAACAGGGTCGCTGTCCCGAGTGTGGCGCACAGGGCGTCACCGACGAGAAGCACGGGGAGACAGTCTGTCAGGAGTGTGGCGTCGTCTTCGAGGAGGGTCACGTCGACCGCGGGCCGGAGTGGCGGAGTTTCGACGCGACCGAGAAGGCCGAGAAGTCCCGCGTCGGGTCGCCGACGACCGAACTGCTGCACGACAAGGGGCTGTCGTCGGTCATCGACTGGCAGAACCGCGACGCCAACGGACAGACCCTTTCGGCGCGAAAGCGCGAGAAGATGTCCCGCCTGCGGACCTGGGACGAGCGGTTCCGCGCCCAGAGCGCCCAGGACCGCAACCTCAAGCAGGCCCTCGGCGAGATCGACCGCATGGCCTCGGCGCTGGGCGTCCCCAAGAACGCCCGCAAGACCGCTTCCGTGATCTACCGCCGGGCGCTGGAGGCGGAACTCATCCCCGGTCGCTCCATCGAGGCGATGGCGACGGCCTCGCTCTACGCGGGCGCCCGCCAGGCCGACGTCCCCCGGACGCTGGACGAACTGGAGACGGTGAGCCGCGTCGAGCGCAAGGAGTTCGCTCGCGCGTACCGCTACGTCGCGCGCGAACTCGAACTCGCGATGGAGCCGACCGACCCGACCCAGTACGTCCCGCGCCTGTCCTCGGACCTGGACCTGCCCGAGGAGACCGAACAGCGCGCGGCCGAACTGCTGGAGGCGGGCAAGGCCGAGGCGGTCCACTCCGGAAAGAACCCGGTCGGCCTCGCCGCGGCGGCCATCTACGCCGCCGGTCGGCTCACCAACACCGACGTCACCCAGCACGAGGTGGCCGACGTGGCCGACGTCTCGGCGGTGACGATCCGCGACCGCTACACCGAACTGCTCGACGCGGCCGAACGGGCCGCCTGA
PROTEIN sequence
Length: 324
MTSTDRTIRTRTSGSIEREESTERTEQGRCPECGAQGVTDEKHGETVCQECGVVFEEGHVDRGPEWRSFDATEKAEKSRVGSPTTELLHDKGLSSVIDWQNRDANGQTLSARKREKMSRLRTWDERFRAQSAQDRNLKQALGEIDRMASALGVPKNARKTASVIYRRALEAELIPGRSIEAMATASLYAGARQADVPRTLDELETVSRVERKEFARAYRYVARELELAMEPTDPTQYVPRLSSDLDLPEETEQRAAELLEAGKAEAVHSGKNPVGLAAAAIYAAGRLTNTDVTQHEVADVADVSAVTIRDRYTELLDAAERAA*