ggKbase home page

sw_4_scaffold_1858_1

Organism: SW_4_Halosimplex_carlsbadense_69_24

partial RP 29 / 55 MC: 3 BSCG 17 / 51 ASCG 19 / 38
Location: comp(102..2207)

Top 3 Functional Annotations

Value Algorithm Source
Formate dehydrogenase subunit alpha n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8J2V6_HALJB similarity UNIREF
DB: UNIREF100
  • Identity: 86.1
  • Coverage: 707.0
  • Bit_score: 1278
  • Evalue 0.0
formate dehydrogenase subunit alpha similarity KEGG
DB: KEGG
  • Identity: 86.1
  • Coverage: 707.0
  • Bit_score: 1278
  • Evalue 0.0
Formate dehydrogenase subunit alpha {ECO:0000313|EMBL:ELY34918.1}; Formate dehydrogenase, alpha subunit {ECO:0000313|EMBL:ADJ15063.1}; TaxID=795797 species="Archaea; Euryarchaeota; Halobacteria; Halob similarity UNIPROT
DB: UniProtKB
  • Identity: 86.1
  • Coverage: 707.0
  • Bit_score: 1278
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Halalkalicoccus jeotgali → Halalkalicoccus → Halobacteriales → Halobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 2106
ATGTCCAGTGACGACGAGCCCGTCAAGACCATCTGCCCGTACTGCGGCGTCGGCTGCGGTATCAAGGTGAACCCCGGCGAGGAGCCGGGCGACATGCGGTTCATGCCGTGGGGGGACGCGCCGGTCAACGAGGGGCGGGTCTGCATCAAGGGCGGCGCGGCGACGGAGGTGGTCGCCCACGAGGACCGCCTGACCGACCCCCTGATCAAGGAGGACGGCGAGTTCCGCGAGGCCTCCTGGGCGGAGGCCTACGACCTGGTCGTCGGCGAACTCGAGCGGATCCGCGAGGAGTACGAGCCCGACGCGATGGGCTTTTTCGGCTCCTCGAAGACGATGAACGAGGAGAACTACCTCCTCCAGAAACTGGCCCGGCGCTACGGGACCAACAACGTGGACAACTGCACCCGGATGTGTCACGCCTCGACGGTGTGGGCGCTCCGGACGAGCCTGGGCGCGGGGGCGATGACCAACAGCATGGCCGACCTGCGCGAGGCGGCCGACGTCTTCTGGATCCAGGGGGCAAACCCCGGCGAGCAACACCCCATCGCCAACAGCGTCTACTTCAGGCAGGCGGTCAACGAGGGCGCGACCGTCGTCCAGGTCGACCCCCACGCCAACAAGACGACGCGGTCGTTCAAGATAGACGAGACCGACCGCCACGTGCACCTCCAGCTCGAACCCGGGACGGACATCCCCCTGCTGAACGTCGTCCTCAAGACCGTCCTGGAGAACGGCTGGGTCGACGAGGAGTTCGTCGCGGAGCGCACCGAGGGGTTCGACCACCTCGAAGAGACCCTCGCGGACTTCGACAAGGAAGCCGCCGCCGAGGAGTGTGGCGTCCCCCTCGAAGACATCGAGGCTGCCGCGGAGACGTACGCCACGGCCGAGAACGCGGCCATCTTCACCGGGATGGGGATGAGCCAGCACACCTGCGGCGTCGACAACGTGCAAAACGAGATCAACCTCGCGCTGGTGACGGGCAACCTCGGGCGGCCGGGCACCGGCGTCAACCCGCTGCGCGGCCAGAACAACGTCCAGGGGACGTGTGACGTGGGCGCGATGCCGAACGTCCTCCCGGGCTACCAGCTCGTCGACGACGACGAGGCCCGCGAGTCCGTCGAGGACGTCTGGGGCTTCGAGGTTCCGGACGAGCCCGGGCTGACGAACGTCGAGATATCCCACGAGGCGGGCGAGTCGATCCACGGGCTGTACATCATGGGCGAAAACCCCGTGATGTCCGAACCCGATGGCAACCGCGTCGAGGAACGTCTCCAAGAGCTGGAGTTCATCGTCGCCCAGGACATCTTCATGACCGAGACGGCCAAATACGCCGACGTGGTCCTCCCGGCGACGACCTGGGCCGAGCGCGGCGGCACCGTCACGAACACCGACCGGCGCGTCCAGCTGATGCGCCCCGTCGAGAAGGTCCACGAGAACACGAAACACGACCTCGACATCCTCACTGAAGTGGGCACCCGCCTGTTCGGCGACCCCTTCGACTTCGCGGACGTCGAGGCGGTGTTCGAGGAACTCCGGCAGGTCTGTCCCAGCTACCACGGGATGACCTACGACGCGCTCGACGAGGAGGGGATCCAGTGGCCCTGCTACGAGCCCGGCGACGAGGGCGACCAGTACCTCTACGAGGACGGCTTCGAGACCGACAGCGGCCTCGGGCAGATCGAGGGCGTGCGCCACCAGGAACCCGAGGAGACACCCGACGAGGAGTACCCGCTCATCCTGACGACGGCGCGACTCGAAGAGCACTACAACACGGGGACGATGAGCCGGCGCTCGCCGACGCTGAAGCGCCAGTACCCCGGGAACTTCGTCGACGTCCACCCGAACGACGCCGAGCGCTACGGCATCGAGGACGGCCAGGAGGTCCGGCTCGAATCCCGACGCGGCGAGATCACCGTCGAGGCGCACGTCACCGAGGACATCAAGGAGGGGTCGGTCTGGACGACGCCCCACTTCGCGGCCGCCTCGGCCAACCGTCTGACCAACGACGTGCTCGACGAGCGCGCCAAGATCCCCGAGTACAAGGCCGCCGCCGCCGAGATAGAGGTCGACATCGAACCGACGGACGCCGCACCCGCCGACGACTAG
PROTEIN sequence
Length: 702
MSSDDEPVKTICPYCGVGCGIKVNPGEEPGDMRFMPWGDAPVNEGRVCIKGGAATEVVAHEDRLTDPLIKEDGEFREASWAEAYDLVVGELERIREEYEPDAMGFFGSSKTMNEENYLLQKLARRYGTNNVDNCTRMCHASTVWALRTSLGAGAMTNSMADLREAADVFWIQGANPGEQHPIANSVYFRQAVNEGATVVQVDPHANKTTRSFKIDETDRHVHLQLEPGTDIPLLNVVLKTVLENGWVDEEFVAERTEGFDHLEETLADFDKEAAAEECGVPLEDIEAAAETYATAENAAIFTGMGMSQHTCGVDNVQNEINLALVTGNLGRPGTGVNPLRGQNNVQGTCDVGAMPNVLPGYQLVDDDEARESVEDVWGFEVPDEPGLTNVEISHEAGESIHGLYIMGENPVMSEPDGNRVEERLQELEFIVAQDIFMTETAKYADVVLPATTWAERGGTVTNTDRRVQLMRPVEKVHENTKHDLDILTEVGTRLFGDPFDFADVEAVFEELRQVCPSYHGMTYDALDEEGIQWPCYEPGDEGDQYLYEDGFETDSGLGQIEGVRHQEPEETPDEEYPLILTTARLEEHYNTGTMSRRSPTLKRQYPGNFVDVHPNDAERYGIEDGQEVRLESRRGEITVEAHVTEDIKEGSVWTTPHFAAASANRLTNDVLDERAKIPEYKAAAAEIEVDIEPTDAAPADD*