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sw_4_scaffold_2401_3

Organism: SW_4_Halosimplex_carlsbadense_69_24

partial RP 29 / 55 MC: 3 BSCG 17 / 51 ASCG 19 / 38
Location: comp(516..839)

Top 3 Functional Annotations

Value Algorithm Source
rpoM2; DNA-directed RNA polymerase subunit M (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 81.3
  • Coverage: 107.0
  • Bit_score: 198
  • Evalue 7.40e-49
DNA-directed RNA polymerase subunit {ECO:0000256|PIRNR:PIRNR005586}; EC=2.7.7.6 {ECO:0000256|PIRNR:PIRNR005586};; TaxID=634497 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacte similarity UNIPROT
DB: UniProtKB
  • Identity: 81.3
  • Coverage: 107.0
  • Bit_score: 198
  • Evalue 3.70e-48
DNA-directed RNA polymerase subunit n=2 Tax=Haloarcula hispanica RepID=G0HX58_HALHT similarity UNIREF
DB: UNIREF100
  • Identity: 81.3
  • Coverage: 107.0
  • Bit_score: 198
  • Evalue 2.60e-48

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Taxonomy

Haloarcula hispanica → Haloarcula → Halobacteriales → Halobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 324
ATGCAGTTCTGTGACGAGTGCGGTTCGATGATGCACGCCGACGGCGACGAGATGGTGTGTTCCTCCTGCGAGGCGACGGTCACCAAGGACGAGGAACGCGCCGCGGAGTTCGTCAGCACCGACGAACAGAGCGACGACGAGGTCATCGAGAGCGAGGCGGGCGCCGACTTCGAGGGCAAACCCACGGCCGACGACGTCATCTGCGACGACTGTGGGCACACCGAAGCGTGGTACACGATCAAACAGACCGCCTCCGCCGACGAACCGCCCACGCGGTTTTTCAAGTGCAAGGAGTGTGGGTCCCGCTGGCGGGAGTACTCCTGA
PROTEIN sequence
Length: 108
MQFCDECGSMMHADGDEMVCSSCEATVTKDEERAAEFVSTDEQSDDEVIESEAGADFEGKPTADDVICDDCGHTEAWYTIKQTASADEPPTRFFKCKECGSRWREYS*