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sw_4_scaffold_2852_3

Organism: SW_4_Halosimplex_carlsbadense_69_24

partial RP 29 / 55 MC: 3 BSCG 17 / 51 ASCG 19 / 38
Location: comp(2014..2544)

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L10e n=1 Tax=Halorhabdus utahensis (strain DSM 12940 / JCM 11049 / AX-2) PF3_HALUD">RepID=C7NPF3_HALUD similarity UNIREF
DB: UNIREF100
  • Identity: 92.6
  • Coverage: 176.0
  • Bit_score: 330
  • Evalue 9.50e-88
50S ribosomal protein L10e (L16p) similarity KEGG
DB: KEGG
  • Identity: 92.6
  • Coverage: 176.0
  • Bit_score: 330
  • Evalue 2.70e-88
50S ribosomal protein L10e {ECO:0000256|HAMAP-Rule:MF_00448, ECO:0000256|SAAS:SAAS00015362}; TaxID=1033806 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus similarity UNIPROT
DB: UniProtKB
  • Identity: 92.6
  • Coverage: 176.0
  • Bit_score: 330
  • Evalue 1.30e-87

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Taxonomy

Halorhabdus tiamatea → Halorhabdus → Halobacteriales → Halobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 531
ATGTCCGAGAAGCCCGCCTCGATGTACCGGGACATCGACAAACCCGCGTACACCCGTCGCGAGTACATCACGGGGATCCCGGGGTCGAAGATCGCTCAGCACCAGATGGGCGACAGGAACGCCGACTCCGACGACTACCCGGTCCAGATCAGCCTCGTCGTCGAGGAGTCCGTCCAGCTCCGTCACGGCTCGATGGAGGCCTCCCGCCTGTCGGCCAATCGTCACCTGATCAAGGAACTCGGCGAGGGCAACTACAGGATGGTCCTCCGGAAGTTCCCCCATCAGGTCATCCGCGAGAACAAGCAGGCCACCGGGGCGGGCGCCGACCGCGTCTCCGACGGCATGCGCCAGTCGTTCGGCAAGATCGTCGGCACCGCCGCCCGCATCCAGGCCGGCGAGCGCCTCTTTACGGCCTACTGCGACGTCGACCAGGCCGACGCCGTCAAGGAAGCGCTCCGTCGCGCCTACAACAAGATCACCCCGCCCTGCCGCATCACGGTCGAACGCGGCCAGGAACTCCTGATCGCGTAA
PROTEIN sequence
Length: 177
MSEKPASMYRDIDKPAYTRREYITGIPGSKIAQHQMGDRNADSDDYPVQISLVVEESVQLRHGSMEASRLSANRHLIKELGEGNYRMVLRKFPHQVIRENKQATGAGADRVSDGMRQSFGKIVGTAARIQAGERLFTAYCDVDQADAVKEALRRAYNKITPPCRITVERGQELLIA*