ggKbase home page

sw_4_scaffold_3539_1

Organism: SW_4_Halosimplex_carlsbadense_69_24

partial RP 29 / 55 MC: 3 BSCG 17 / 51 ASCG 19 / 38
Location: 1..699

Top 3 Functional Annotations

Value Algorithm Source
Xylose isomerase n=1 Tax=Halorubrum sp. AJ67 RepID=V6DQX5_9EURY similarity UNIREF
DB: UNIREF100
  • Identity: 84.5
  • Coverage: 232.0
  • Bit_score: 417
  • Evalue 7.80e-114
Xylose isomerase {ECO:0000313|EMBL:CDK38556.1}; TaxID=1173487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum sp. AJ67.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 84.5
  • Coverage: 232.0
  • Bit_score: 417
  • Evalue 1.10e-113
AP-endonuclease/AP-lyase similarity KEGG
DB: KEGG
  • Identity: 79.3
  • Coverage: 232.0
  • Bit_score: 397
  • Evalue 3.10e-108

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Halorubrum sp. AJ67 → Halorubrum → Haloferacales → Halobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 699
ACGGAGATCCGGGAGGCGGTCGAACTCGCCGACCAGCTCGGGGTCGACAACGTCAACACGTTTTCCGGTCTCCCGGCGGGCAGTCCCGACGGCAGCGTCCCCAACTGGATCACGGCGCCCTGGCCGCCCGAGCACGCCGAGGCGCTTGAGTACCAGTGGGAGGAGGTCGCGGTCCCGGTCTGGAGCGACCTCGCGGAGCACGCGGCGGACCACGACGTCAACATCTGCATCGAGATGCACCCCAACATGCTCGTCTACGAGCCGACGAGCATGCTGCGCCTCCGGAACGAGACCAACGACCACGTCGGCGCGAACTTCGACCCCTCGCACCTCTACTGGCAGGGGATCGACGTCACCGAGGCCATCCGCGTCCTGGGCGAGGAGGACGCCATCCACCACTTCCACGCCAAGGACACCGGCCTCTACGAGTCCAACGCCGACGTGAAGGGGTATCTCGACACCGCTCCCTACACGGACGAACCCAACCGCTCGTGGCTGTTCCGCTCGATCGGCTACGGCCACGGCGAGCAACACTGGAAGGACGTCGTCTCGACGCTGCGGATGGTCGATTACGACGGCGCCCTCTCGATCGAACACGAGGACTCGCTGACCTCCGCCAACGAGGGCTTGGAGAAGGCCGTCGACGTCCTCTCGCGGGCCGTCTTCGAGACGACGCCCGGCGAGGCCTACTGGGCCTGA
PROTEIN sequence
Length: 233
TEIREAVELADQLGVDNVNTFSGLPAGSPDGSVPNWITAPWPPEHAEALEYQWEEVAVPVWSDLAEHAADHDVNICIEMHPNMLVYEPTSMLRLRNETNDHVGANFDPSHLYWQGIDVTEAIRVLGEEDAIHHFHAKDTGLYESNADVKGYLDTAPYTDEPNRSWLFRSIGYGHGEQHWKDVVSTLRMVDYDGALSIEHEDSLTSANEGLEKAVDVLSRAVFETTPGEAYWA*