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sw_4_scaffold_1152_2

Organism: SW_4_Halobacteriales_67_20

partial RP 18 / 55 MC: 1 BSCG 12 / 51 MC: 1 ASCG 21 / 38 MC: 2
Location: comp(969..2183)

Top 3 Functional Annotations

Value Algorithm Source
RNA-binding protein AU-1 n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D442_9EURY similarity UNIREF
DB: UNIREF100
  • Identity: 61.8
  • Coverage: 432.0
  • Bit_score: 513
  • Evalue 2.40e-142
RNA-binding protein AU-1 {ECO:0000256|HAMAP-Rule:MF_01910}; AU-binding protein {ECO:0000256|HAMAP-Rule:MF_01910}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacte similarity UNIPROT
DB: UniProtKB
  • Identity: 61.5
  • Coverage: 434.0
  • Bit_score: 513
  • Evalue 3.30e-142
RNA-binding protein AU-1 similarity KEGG
DB: KEGG
  • Identity: 59.4
  • Coverage: 406.0
  • Bit_score: 477
  • Evalue 3.10e-132

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Taxonomy

Halosimplex carlsbadense → Halosimplex → Halobacteriales → Halobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 1215
GTGCACGGCGACGGCGAGGCCGTCAACGGGATCGTCGACAGCCTGCGGGACCTCGCGCTGGACACGTTCGCCTGGGGGGCGGCGCTCCCGCGGGGTGCGGTGTACGCCGGCGAGGTGGTCGAGACGCTCGGCAGCGGCGCGCTGGTCGCCTGCGACGACGCCGGCAACCAGGGGTTCCTGCCGTACTCGAAGACGGCCCGCCACGTCGAGGAGGGCGACACGCTGCGGGTCCAGGTCGCGGAGCCACAGCCGCCCTGGGCTGACCGCCGGCCGGTGCTCGAGACGGCGGTCGAGATTTCGGGCGCGCTCGCGACGCTCGTCCGCGGGCGCGCGTCCGAACGCGACGGGCCGGAACTGGCAGACATCGTGCCGGCCGACCCCCCGGAGGGCTGGGGGATCGAGTGGCACCGCGACGCCGACGACGCCGACCTCGACGCGCTGGGTGCGACGATCGAACGGCTGCGCGAGCGCGCTGCCGACCTCGACGCGGCGCTCGCCGACGCCGACCCACCGGCCGACGCCGCGCCGGCGGTCTACTGGCCCGGCGAGCGCAGCGTCTACTGCTGGTTCGGCCGGGACTCGCGGTTCGCGCTCGACGGGCGCCGCCGGGCCGCGACGACCACGATGGCCGGCCATCATCGGATCAAGGCCGCCGACGAGCGCGCCAGTTCCGGCGTCGACTTCGTGGAAGCCGTTTGCGACAGTCCCGACGAGGGCGAGTTCCCCTTCGACGCGGTCACCCGGCAGTTCGGGCCTGCCGAGGGCGACTCGGTCTCGATCGGCCACGGCAAGCCCGACGGCCGGTGTTACGACCTCGGCCCCGGAGAGGTGACCGGGCGGTCGACCAACGGTCAGGTGACCGTTCGCCGCGAACTCACCCCCGGCGGCACCTACGACGCGCTGGGCGGCGAGATCCAGCCCGGCGACGTTGCGATCACGAAGGTTAGGGAGGGGCGGTGGTGGTACCCGACGGTGTACCGCGGCGAGGACGGCGAGACCCGGGGGACGTACGTCAACGTCTGCACGCCCGTCGAGGTGTTTCCCCGGACGGTCCGGTACGTCGATCTCCACGTCGACGTGATCAAACAGCCGGACGGGACCGTCGAACGGGTCGACGCGGACGAACTCGCGGCCGCCGTGGACGCCGGCGATATCTCTCCAGCACTCGCTGAGAAAGCCCGCGACGTCGCGACGGCCGTCGAGAACGCGCTGTGA
PROTEIN sequence
Length: 405
VHGDGEAVNGIVDSLRDLALDTFAWGAALPRGAVYAGEVVETLGSGALVACDDAGNQGFLPYSKTARHVEEGDTLRVQVAEPQPPWADRRPVLETAVEISGALATLVRGRASERDGPELADIVPADPPEGWGIEWHRDADDADLDALGATIERLRERAADLDAALADADPPADAAPAVYWPGERSVYCWFGRDSRFALDGRRRAATTTMAGHHRIKAADERASSGVDFVEAVCDSPDEGEFPFDAVTRQFGPAEGDSVSIGHGKPDGRCYDLGPGEVTGRSTNGQVTVRRELTPGGTYDALGGEIQPGDVAITKVREGRWWYPTVYRGEDGETRGTYVNVCTPVEVFPRTVRYVDLHVDVIKQPDGTVERVDADELAAAVDAGDISPALAEKARDVATAVENAL*