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sw_4_scaffold_3542_1

Organism: SW_4_Halobacteriales_67_20

partial RP 18 / 55 MC: 1 BSCG 12 / 51 MC: 1 ASCG 21 / 38 MC: 2
Location: comp(3..197)

Top 3 Functional Annotations

Value Algorithm Source
RNA 2',3'-cyclic phosphodiesterase {ECO:0000256|HAMAP-Rule:MF_01940}; Short=RNA 2',3'-CPDase {ECO:0000256|HAMAP-Rule:MF_01940};; EC=3.1.4.- {ECO:0000256|HAMAP-Rule:MF_01940};; TaxID=1227456 species="A similarity UNIPROT
DB: UniProtKB
  • Identity: 66.2
  • Coverage: 65.0
  • Bit_score: 84
  • Evalue 6.10e-14
2'-5' RNA ligase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NBT8_9EURY similarity UNIREF
DB: UNIREF100
  • Identity: 66.2
  • Coverage: 65.0
  • Bit_score: 84
  • Evalue 4.30e-14
2'-5' RNA ligase similarity KEGG
DB: KEGG
  • Identity: 65.6
  • Coverage: 64.0
  • Bit_score: 81
  • Evalue 1.40e-13

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Taxonomy

Halococcus salifodinae → Halococcus → Halobacteriales → Halobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 195
ATGCGACTGTTCGTCAGCGTCGACCTCGACGAGGGCCTCGCCGCCGAGGTCGAACGAGTCCAGGAACCGCTGTCGGATGCGAGCGGCCTCCGGCTGACAGATTCCGAGCAGGCGCACCTCACGCTGAAGTTCCTCGGCGACACCGACCCTGAGAGGGTGCCGGCACTCGGCGACGAACTCCGCCAGGCGGTCGAG
PROTEIN sequence
Length: 65
MRLFVSVDLDEGLAAEVERVQEPLSDASGLRLTDSEQAHLTLKFLGDTDPERVPALGDELRQAVE