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sw_4_scaffold_6842_5

Organism: SW_4_Halobacteriales_67_20

partial RP 18 / 55 MC: 1 BSCG 12 / 51 MC: 1 ASCG 21 / 38 MC: 2
Location: 3014..3880

Top 3 Functional Annotations

Value Algorithm Source
tfbA7; transcription initiation factor TFB id=24650078 bin=uncultivated_archaeon_J07ABHX6 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultivated_archaeon_J07ABHX6 similarity UNIREF
DB: UNIREF100
  • Identity: 79.4
  • Coverage: 287.0
  • Bit_score: 475
  • Evalue 5.10e-131
Transcription initiation factor IIB {ECO:0000256|HAMAP-Rule:MF_00383}; Short=TFIIB {ECO:0000256|HAMAP-Rule:MF_00383};; TaxID=1325472 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" s similarity UNIPROT
DB: UniProtKB
  • Identity: 77.5
  • Coverage: 285.0
  • Bit_score: 457
  • Evalue 1.20e-125
tfb1; transcription initiation factor IIB similarity KEGG
DB: KEGG
  • Identity: 67.6
  • Coverage: 287.0
  • Bit_score: 393
  • Evalue 5.50e-107

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Taxonomy

halophilic archaeon J07HX5 → Halobacteriales → Halobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 867
ATGGCAACGACACAGGCTCAGACGTGTCCGGAGTGTGAGGGAACCGTTCGCGCGGGCGAGTGCGAGACAGTCTGTACCAGCTGCGGGCTGGTGGTCGACGAGCACGCGATCGACCCGGGGCCGGAGTGGCGGTCGTTCGACGACGACGACACCAACCCGGAGCGGACAGGGGCACCGTTGACGCGGTCGCGCCATGACCGCGGGCTCTCGACGGAGATCGGCCGGTCGACCCGGCTCAAGGGGCGTAAGCGCCGCCGGATCGCCCGGCTGCGCCGCCAACACAAGCGGACGCAGATCCGCAGCAAGGCCGAGCGCAACCGCGTGTACGCGTTCACCGAGATCCGGCGGCTGGTGAGCAGGCTCGAGCTGCCCGAGCACGTCCGCGAGCAGTCCTGTGCCCTGTTCGAGTCCGCCCAGAGCGAGGGGCTCCTGCAGGGGCGCTCGATCGAGGGGTTCGCCGCGGCGGCCGTCTACGCGACCGCCCGGACCGCCGCCGTCGCGCGGACGATCCCGGAGATCACCGACGCCGCGAAGGCGACCCGCGACGAACTCGACGTTGCCTACGACGCGCTGAACCGCGAGTTGGGGCTCCCGACGGGGCCGATCGACCCCCGCGAGTACCTCGCCCGCTTTGCGAGCAACCTCGGCCTGCCCCAGGGGATCGAGCAGCGCGCCCGGACGCTCGCGACCGAGGCCCGCAAGCGCGGCATCGACACCGGCCGCAACCCCGGCGGGGTGGCCGCGGCCTGTCTGTACACCGCTGCCGAGCGCGAGAGCTACCCGCTCACCCAGCAGGCTGCCGCCGACGTCGCCGACGTCGCGCCCGTCACGATCCGCTCGACGTACTACGAGTTCGAGGAAGAGTGA
PROTEIN sequence
Length: 289
MATTQAQTCPECEGTVRAGECETVCTSCGLVVDEHAIDPGPEWRSFDDDDTNPERTGAPLTRSRHDRGLSTEIGRSTRLKGRKRRRIARLRRQHKRTQIRSKAERNRVYAFTEIRRLVSRLELPEHVREQSCALFESAQSEGLLQGRSIEGFAAAAVYATARTAAVARTIPEITDAAKATRDELDVAYDALNRELGLPTGPIDPREYLARFASNLGLPQGIEQRARTLATEARKRGIDTGRNPGGVAAACLYTAAERESYPLTQQAAADVADVAPVTIRSTYYEFEEE*