ggKbase home page

sw_4_scaffold_3619_8

Organism: SW_4_Halobacteriales_67_16

partial RP 22 / 55 MC: 2 BSCG 17 / 51 ASCG 20 / 38
Location: comp(3551..3733)

Top 3 Functional Annotations

Value Algorithm Source
RNA-binding protein Lsm n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3INQ7_NATPD similarity UNIREF
DB: UNIREF100
  • Identity: 77.0
  • Coverage: 61.0
  • Bit_score: 94
  • Evalue 3.90e-17
snRNP-like protein similarity KEGG
DB: KEGG
  • Identity: 77.0
  • Coverage: 61.0
  • Bit_score: 94
  • Evalue 1.10e-17
RNA-binding protein Lsm {ECO:0000313|EMBL:CAI50245.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (st similarity UNIPROT
DB: UniProtKB
  • Identity: 77.0
  • Coverage: 61.0
  • Bit_score: 94
  • Evalue 5.50e-17

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Natronomonas pharaonis → Natronomonas → Halobacteriales → Halobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 183
ATGGCCGACCGACCGCTGGACGTGCTCGAAGCGACCCTCGGTGAGGACGTGACGGTGACGCTGAAGGGCGGCAACACCGTCACGGGGACGCTCGACGGCTACGACCAGCACATGAACCTCGTACTGGAGGGGGAGAACACAACGATTATCCGCGGCGATAACGTCGTTTCGATCCAACCATGA
PROTEIN sequence
Length: 61
MADRPLDVLEATLGEDVTVTLKGGNTVTGTLDGYDQHMNLVLEGENTTIIRGDNVVSIQP*