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sw_4_scaffold_4220_3

Organism: SW_4_Halobacteriales_67_16

partial RP 22 / 55 MC: 2 BSCG 17 / 51 ASCG 20 / 38
Location: 681..2057

Top 3 Functional Annotations

Value Algorithm Source
Probable tRNA pseudouridine synthase D {ECO:0000256|HAMAP-Rule:MF_01082}; EC=5.4.99.27 {ECO:0000256|HAMAP-Rule:MF_01082};; tRNA pseudouridine(13) synthase {ECO:0000256|HAMAP-Rule:MF_01082}; tRNA pseud similarity UNIPROT
DB: UniProtKB
  • Identity: 62.5
  • Coverage: 467.0
  • Bit_score: 554
  • Evalue 1.50e-154
Probable tRNA pseudouridine synthase D n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0LMB0_HALJP similarity UNIREF
DB: UNIREF100
  • Identity: 62.5
  • Coverage: 467.0
  • Bit_score: 554
  • Evalue 1.00e-154
tRNA pseudouridine synthase, TruD family similarity KEGG
DB: KEGG
  • Identity: 63.2
  • Coverage: 467.0
  • Bit_score: 549
  • Evalue 9.50e-154

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Taxonomy

Haloarcula japonica → Haloarcula → Halobacteriales → Halobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 1377
ATGCGCGAGGCACACGACCGCGAGCAGGCGACCGGCGTCGACTACTACGTCAGCGACGCCGACGGGACGGGTGGCCGCCTCCGGGCCGCGCCCGAGGACTTCCGCGTCCGCGAGCTGGAGGCGTTCGACTACGAGCCGCTCGACGCCGACCCGGGGTCGTACGCCCATCTCGTGTTTCGGGCGACCCTGCGCGGCTGGGACACGAACGACTTCGCGGGCGCGCTCGCCTCGAAGCTCGGCATCTCTCGCGAACGGGTGTCGTGGGCCGGGACGAAGGACAAGGACGCGGTGACGACACAGCTGTTCTCCGTCCAAGGGATCGCTCCCGACGCGCTCCCGACGCTCGGCGAGGCCGACATCGAGCCGCTCGGCCGCGCGGGACGGCCGGTGCTGTTCGGCGACCTCGCGGGCAACGCCTTCGAGGTGACCATCGCCGACCCCGACACACCGGCGAACGCCGCCCGCGTGACGGCGCAGTTGGGCGCGTTCGGCGGCAGGGAGGGCGACGCCGCGGACGACACGGGTGAGCGCCGGATCGGCGTGCCGAACTTCTACGGCCCACAGCGGTTCGGGAGCGCGCGACCGGTGACCCACCGGGTCGGGCTGGCGCTCCTGCGCGGCGAGTGGCAAGACGCCGTCCGGACCTACGTCTGTCACCGCACGGACGCGGAGCCGGCCGAGAGCGCCAGCGCTCGCGAACGGGTCGCCGAGCGCTGGGGCGACGACCCGGGAGCGCTGACCGAACTGCTCCCCGGTCGCCTCCGCTACGAGCGGTCGCTGCTACAGGGACTCGCAGAAGCGGGCGGCTACACCGCCGAGGACTGTCGGCACGCGCTGGAGCGTCTGCCGTCGAATCTCCAGCAGCTGTTCGTCCACGCCGCGCAGTCGTTCGCGTTCAACCGCATCCTCTCCGCGCGGCTGGAGCGCGGCCTGCCGTTCGACGAAGTCGTCGCGGGTGACGTCGTCTGCTTCGCCGACCGAGACCGGACCGTCTCGACCGGCGACGCGGCCCTCGCCGTACCGGACCCCGACCGCGCACAGCGGGTCGACGCCGACCGCGTGGCGACGGTGAACCGGCACGTCGAGCGCGGCCGAGCCTTCGTCACCGCGCCGCTGGTCGGCACGGACACCGAGTTCGCGGACGGCGAGCCGGGGGAGATAACTCGGTCGGTGTTGGACGAGCTCGACCTCGCCCGCGCGGATTTCGACCTCCCCGGCGAGTTCGGCTCGGACGGGACGCGCCGCGCGATACTTCTCACCACCGACCTCGCCGTGCGCCGCGACCCGCTCACCTTCTCCTTCGCGCTGCCGAAAGGGTCGTACGCGACGACGCTACTGCGCGAGTATCTGAAGACGGATCCGACGGCACTAGGCTGA
PROTEIN sequence
Length: 459
MREAHDREQATGVDYYVSDADGTGGRLRAAPEDFRVRELEAFDYEPLDADPGSYAHLVFRATLRGWDTNDFAGALASKLGISRERVSWAGTKDKDAVTTQLFSVQGIAPDALPTLGEADIEPLGRAGRPVLFGDLAGNAFEVTIADPDTPANAARVTAQLGAFGGREGDAADDTGERRIGVPNFYGPQRFGSARPVTHRVGLALLRGEWQDAVRTYVCHRTDAEPAESASARERVAERWGDDPGALTELLPGRLRYERSLLQGLAEAGGYTAEDCRHALERLPSNLQQLFVHAAQSFAFNRILSARLERGLPFDEVVAGDVVCFADRDRTVSTGDAALAVPDPDRAQRVDADRVATVNRHVERGRAFVTAPLVGTDTEFADGEPGEITRSVLDELDLARADFDLPGEFGSDGTRRAILLTTDLAVRRDPLTFSFALPKGSYATTLLREYLKTDPTALG*