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sw_4_scaffold_1771_7

Organism: SW_4_Halobacteriales_64_12

partial RP 18 / 55 BSCG 13 / 51 ASCG 20 / 38 MC: 1
Location: 3998..4864

Top 3 Functional Annotations

Value Algorithm Source
Transcription initiation factor IIB n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NAB5_9EURY similarity UNIREF
DB: UNIREF100
  • Identity: 72.7
  • Coverage: 278.0
  • Bit_score: 398
  • Evalue 7.90e-108
Transcription initiation factor IIB {ECO:0000256|HAMAP-Rule:MF_00383}; Short=TFIIB {ECO:0000256|HAMAP-Rule:MF_00383};; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Hal similarity UNIPROT
DB: UniProtKB
  • Identity: 72.7
  • Coverage: 278.0
  • Bit_score: 398
  • Evalue 1.10e-107
tfb7; transcription initiation factor TFB similarity KEGG
DB: KEGG
  • Identity: 66.1
  • Coverage: 289.0
  • Bit_score: 381
  • Evalue 2.20e-103

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Taxonomy

Halococcus salifodinae → Halococcus → Halobacteriales → Halobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 867
ATGAGTCGGGCACAGACAGTTAGGAGTTGTCCCGAGTGCAATGGGCGGCTCGAAGCCGGCGAGGAGACCTTCTGTAACGACTGTGGGCTGGTCGTCGCCGAGGACTACCTCGATCGGGGTCCCGAGTGGCGATCGTTCGATGACGAGAGCGAGAACCGCGAGCGAACCGGCGCGCCCCTCACCCGGGCCCGACACGATCGCGGGCTCTCGACGGAGATCGGCCGGTCGAAGGACCTGAGTAGCAGAAAGCGCCGCCAGCTCGCTCGAATGCGCCGCCAGCACAACCGCGCGCGCATCGCCTCGAAGGCCGATCGCAATCGAGTGTATGCCTTCACCGAGATCCGCCGGCTGGTCAGCAGCCTCGAACTGCCCCAGAGCATCCGCGATCAGGCCTGTGTGCTCTTCGAGTCCGCCCAGTCCGCGGACCTACTACGGGGCCGTTCGCTAGAGGGCTTCGCCGCCGCGTCGGTATATGCGGTCTGTCGGACCGCTGCGGTCTCCCGAACGGTCGGTGAGATCGCTGACGTCGCTCGTGCCTCGGAGGCCGAACTCAAAGCCGCCTACGACGCGCTGAATCGTGAACTCGGCTTGCCGACCGGTCCGATCGATCCCGCCGAGTACATCGGTCGGTTCGCGAGTGAACTCGACGTCTCGGCGGACATCGAAGCCCGTTCGCGCGAGTTCGTCACCGATGGACGCGATCGCGGGCTGATCAACGGCCGCAATCCCAGTGGCTTCGCTGCCACCTGCTTGTATGCCGCGGCGATCGAAGCCGGCCACGACCTCACCCAGCGCGAGGCCGCTTCCGTCGCCGATGTTACTCCCGTTACCCTCCGGACGGCCTACTACGACCTGATCGAGGACTGA
PROTEIN sequence
Length: 289
MSRAQTVRSCPECNGRLEAGEETFCNDCGLVVAEDYLDRGPEWRSFDDESENRERTGAPLTRARHDRGLSTEIGRSKDLSSRKRRQLARMRRQHNRARIASKADRNRVYAFTEIRRLVSSLELPQSIRDQACVLFESAQSADLLRGRSLEGFAAASVYAVCRTAAVSRTVGEIADVARASEAELKAAYDALNRELGLPTGPIDPAEYIGRFASELDVSADIEARSREFVTDGRDRGLINGRNPSGFAATCLYAAAIEAGHDLTQREAASVADVTPVTLRTAYYDLIED*