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sw_4_scaffold_2501_5

Organism: SW_4_Halobacteriales_64_12

partial RP 18 / 55 BSCG 13 / 51 ASCG 20 / 38 MC: 1
Location: 2439..2759

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit {ECO:0000256|PIRNR:PIRNR005586}; EC=2.7.7.6 {ECO:0000256|PIRNR:PIRNR005586};; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobact similarity UNIPROT
DB: UniProtKB
  • Identity: 79.2
  • Coverage: 106.0
  • Bit_score: 193
  • Evalue 1.20e-46
DNA-directed RNA polymerase subunit n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M5B6_9EURY similarity UNIREF
DB: UNIREF100
  • Identity: 79.2
  • Coverage: 106.0
  • Bit_score: 193
  • Evalue 8.40e-47
tfs2; transcription elongation factor TFS similarity KEGG
DB: KEGG
  • Identity: 73.8
  • Coverage: 107.0
  • Bit_score: 174
  • Evalue 1.90e-41

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Taxonomy

Halococcus hamelinensis → Halococcus → Halobacteriales → Halobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 321
ATGCAGTTCTGCGAGGAGTGCGGTTCGCTGATGCACGCCGACGGCGATGAGATGGTCTGTTCGTCCTGTGAGGCCCGACTCGCGAAGGACGAGGACGTCGCGGCTCAGTACGTGAGTACCGAATCCCAGACGTTCGACGACGTGATCGAGACCACCGAAGACGCCGCCGAGGAGGGCTTGCCGACCGCCGAGGTGACCTGTGAGGAGTGCGGCAACGACCGAGCGTGGTACACGATCAAACAGACCGGGGCGGCCGACGAGCCCCCGACGCGCTTTTTCAAGTGCACGGAGTGTGGCTATCGCTGGCGCGGGTACGGCTGA
PROTEIN sequence
Length: 107
MQFCEECGSLMHADGDEMVCSSCEARLAKDEDVAAQYVSTESQTFDDVIETTEDAAEEGLPTAEVTCEECGNDRAWYTIKQTGAADEPPTRFFKCTECGYRWRGYG*