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sw_4_scaffold_4459_2

Organism: SW_4_Halobacteriales_64_12

partial RP 18 / 55 BSCG 13 / 51 ASCG 20 / 38 MC: 1
Location: comp(101..622)

Top 3 Functional Annotations

Value Algorithm Source
Transcription factor E n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N635_9EURY similarity UNIREF
DB: UNIREF100
  • Identity: 81.2
  • Coverage: 170.0
  • Bit_score: 290
  • Evalue 1.40e-75
Transcription factor E {ECO:0000256|HAMAP-Rule:MF_01909, ECO:0000256|SAAS:SAAS00008967}; Short=TFE {ECO:0000256|HAMAP-Rule:MF_01909};; TFIIE subunit alpha homolog {ECO:0000256|HAMAP-Rule:MF_01909}; Tr similarity UNIPROT
DB: UniProtKB
  • Identity: 81.2
  • Coverage: 170.0
  • Bit_score: 290
  • Evalue 2.00e-75
transcription initiation factor IIE, alpha subunit similarity KEGG
DB: KEGG
  • Identity: 78.7
  • Coverage: 174.0
  • Bit_score: 286
  • Evalue 4.30e-75

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Taxonomy

Halococcus thailandensis → Halococcus → Halobacteriales → Halobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 522
ATGGCGTTCGAGGAGCTACTCGAAGACCCCGTCATCCAGACGTACCTCCACGAACTCGTCGGCCCTCGTGGGATGCCCGTCGCCGCCGCGCCACCCGACGGCGAGGTGACCGACGAGGAACTCGCCGAGGACCTGGATCTCGAACTCAATGACGTGCGCCGCGCGCTTTTCATCCTCTACGAGAACGATCTCGCGACTTACCGCCGGCTGCGCGATGAGGACTCGGGGTGGCTCACCTATCTCTGGACCTTCGAGTACGATCAGATACCCGAACAGCTAGAGGAAGAGATGCACAAGCTCCTAAAGGCGCTCGAAGAACGCCGGGCGTACGAACGGAACAACGAGTTCTACCTCTGTGAGGGAGAAGGCGTGCGCTATGAGTTCTCCGAGGCAATGGACTTCGGCTTCGAGTGTCCCGACGGCTCGGAAATGGAACCGATGGACAACGATCACTTGATCGAGGCAATGGATCGGCGGATCGCCGAACTCCGCTCGGAACTCAACGTCGAACTCGAGGCGTAG
PROTEIN sequence
Length: 174
MAFEELLEDPVIQTYLHELVGPRGMPVAAAPPDGEVTDEELAEDLDLELNDVRRALFILYENDLATYRRLRDEDSGWLTYLWTFEYDQIPEQLEEEMHKLLKALEERRAYERNNEFYLCEGEGVRYEFSEAMDFGFECPDGSEMEPMDNDHLIEAMDRRIAELRSELNVELEA*