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sw_4_scaffold_4310_4

Organism: SW_4_Halobacteriales_64_12

partial RP 18 / 55 BSCG 13 / 51 ASCG 20 / 38 MC: 1
Location: comp(1999..3477)

Top 3 Functional Annotations

Value Algorithm Source
tRNA-splicing ligase RtcB {ECO:0000256|RuleBase:RU371113}; EC=6.5.1.- {ECO:0000256|RuleBase:RU371113};; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; H similarity UNIPROT
DB: UniProtKB
  • Identity: 51.9
  • Coverage: 497.0
  • Bit_score: 483
  • Evalue 4.50e-133
tRNA-splicing ligase RtcB n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CQD0_9EURY similarity UNIREF
DB: UNIREF100
  • Identity: 51.9
  • Coverage: 497.0
  • Bit_score: 483
  • Evalue 3.20e-133
conserved hypothetical protein (UPF0027) similarity KEGG
DB: KEGG
  • Identity: 49.6
  • Coverage: 496.0
  • Bit_score: 465
  • Evalue 1.50e-128

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Taxonomy

Halosimplex carlsbadense → Halosimplex → Halobacteriales → Halobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 1479
GTGTTCGAGATCGACGGCGAGTACACGACGGCGACGGTGATGGGTGAGCGTGACATGTTCGACGATCGGTTCGTCGAGCAGGTCCAGCGACTCGTCGATCACGAGGCGTTCACTAACCGAGTCGTCATCCAACCCGACGGTCACCCTGGGGCCGGAGCCGTCATCGGATTCACGATGCCGCTCGGCGAGAAGGTAGTTCCTCAAACAGTCGGCAGTGACATCGGCTGTGGCGTCGAAGCCGCTGCGCTCGGTGTCGAGGAGCTGCCGCTCTCCCACGCGGAGGCCGACGAGCGAATCCGTGGGGCCGTCCCCGTCGGCCGAGCAGTACACGACTTCGACAGTGCGATGCACGTCGGTAACGACTTTCCCTGGGCGGCAGTCACCGATCGGTTCGAGCGGTTCAACGCCTCTTACGCCGAGCGCTCCGGCCGCGAGATCGACTTGGAGGACCATACCCCAAATGGCGAGTACGACTTGGAGTACTTCAAGGCGCTCTGTGAGAAGGTGGGGTACGATCTCAACCGGGCCATCGCGTCGGCCGGCACGCTCGGCGGTGGCAATCACTTCCTCGAACTCGCCCGCTCGGAGCGCGAAAGCGATCTCTGGATCGTGCTGCACTCGGGCTCGCGAGGCCTGGGATCGACGGTCGCGAACTACTGGCAGAACCGGGCGATCGAAACGCGGCGGGCCGAGCAGGCGCGCGAGGCGATCGTCGACCTCCTCGAAGCGGGGTATGGCCCCTACCTGAAGTTCGATCCCGAGACCAGCAGCGACGAAGACCTACTTCTGTGGCTCCAGGGCGGGAGGGGCGAGTCCTTCATGCGAAAGGAGAGGGTTCGCGAGGAGTTCGAGGGCGAGGCCATCGACGAGACCTTCGCCCGGCTCAAGGAGGCGATCCCGGGTCGCGGCGAGGCCGCCGAGGACGACAGCGACGCGGCTGAGGAGGACCTCGCTTACCTCGAGGGAGCCGAGGCGCATGGCTACTTCGTCGATATGCTCTTCTGCCAGGAGTACGCCGCGACGAACCGCCGGCGGATGGTCGGGTTAGCCTGTAAAGCGCTCGGTCTCCCCGAGGCTCCAGTCGAGATCCTCGATTCCCCGCACAATGTCATCGACTTCGAGGACGGCGTGATCCGAAAGGGCGCGACCCGGGTGCAGGAGGGCGAGCGTGCGGTGATTCCCTTCACGATGCGCCACGGCTCGATCGTTATCGAGGGGAAGGGAAACGCCGAGTGGAACCGCTCTTCACCCCACGGCGCGGGTCGGCTGATGAGCCGCACACAGGCCTTCGAGGACCTCTCGATGGAGGAGTACGAGGACCTGATGGACGGCATCTACTCGACGAGCGTCACCGCCGAGACCTTGGACGAGTCGCCCGACGCGTACAAGGACCCCGCGGCGATCGAGGAAGCGATGGCCGAGACGGCGACGGTCCTCGATCGGCTGGTTCCCGAGCACAGCCTGAAAGCCGAGGACTGA
PROTEIN sequence
Length: 493
VFEIDGEYTTATVMGERDMFDDRFVEQVQRLVDHEAFTNRVVIQPDGHPGAGAVIGFTMPLGEKVVPQTVGSDIGCGVEAAALGVEELPLSHAEADERIRGAVPVGRAVHDFDSAMHVGNDFPWAAVTDRFERFNASYAERSGREIDLEDHTPNGEYDLEYFKALCEKVGYDLNRAIASAGTLGGGNHFLELARSERESDLWIVLHSGSRGLGSTVANYWQNRAIETRRAEQAREAIVDLLEAGYGPYLKFDPETSSDEDLLLWLQGGRGESFMRKERVREEFEGEAIDETFARLKEAIPGRGEAAEDDSDAAEEDLAYLEGAEAHGYFVDMLFCQEYAATNRRRMVGLACKALGLPEAPVEILDSPHNVIDFEDGVIRKGATRVQEGERAVIPFTMRHGSIVIEGKGNAEWNRSSPHGAGRLMSRTQAFEDLSMEEYEDLMDGIYSTSVTAETLDESPDAYKDPAAIEEAMAETATVLDRLVPEHSLKAED*