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sw_4_scaffold_4317_3

Organism: SW_4_Halobacteriales_64_12

partial RP 18 / 55 BSCG 13 / 51 ASCG 20 / 38 MC: 1
Location: 1290..2123

Top 3 Functional Annotations

Value Algorithm Source
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171, ECO:0000313|EMBL:ELY61487.1}; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171, ECO:0000313|EMBL:ELY61487.1};; tRNA pseudouridine(38-40) sy similarity UNIPROT
DB: UniProtKB
  • Identity: 59.4
  • Coverage: 286.0
  • Bit_score: 322
  • Evalue 4.40e-85
tRNA pseudouridine synthase A n=1 Tax=Natronococcus amylolyticus DSM 10524 RepID=L9XIR6_9EURY similarity UNIREF
DB: UNIREF100
  • Identity: 59.4
  • Coverage: 286.0
  • Bit_score: 322
  • Evalue 3.10e-85
Pseudouridine synthase I, TruA, alpha/beta domain protein similarity KEGG
DB: KEGG
  • Identity: 59.2
  • Coverage: 284.0
  • Bit_score: 321
  • Evalue 3.30e-85

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Taxonomy

Natronococcus amylolyticus → Natronococcus → Natrialbales → Halobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 834
ATGGGAGAGCCGGAAACCGACCGACCGTCGATGCGGGCGTTCCGGATCGCCTACGACGGCCGAGGCTACTGGGGGTTCCAGCGCCAACCCGACGTCGAGACGATCGAGGACGAGTTCTTCGAGGCGCTGCGTGCGCTCGGTATCCTCGACGAGAGCGCACGGAAACCCGAGGGCTACGCTGCCGCCGGACGTACCGATAGGGGCGTTTCGGCACTCGCCCAGACGATCGGGCTCCGGTGTCCGGCGTGGTGTACGCCACGGGCACTGAACGCCGAACTCCCAGGGGCGATCCGAGCATGGGCGAGCGCCGACGTTCCGAGCGACTTTCATGCGACCCACGACCCGGAACTCAGGGAGTATACCTACTACCTGTACGCCCCCGAAGCCGATCGCGAACTGTTGGAAGCGGCGCTCGACGCGCTCTCGGGCACCCACGATCTCCGGGACTTGACGCCCGACGAGCGAAACACGACTCGGACGCTCGAGACGGACCTGGAGGACAACGCCCTTTTGTTCGTGCTCCGGGTTCGCGCCGGCGGGTTCGCCCGGGAGTTGGTTCGTCGGCTCGTCGCGCTCGTCCGTTCGGTAGCGACCGGTGAGCGACCGTTCTCACACGTCGAGCGGGTACTCGCCGAGGAGCGACTCGACGGTGGGGCGGGGGTCGGCCCAGCACCTGCCTACCCGCTCGTGCTCACCGAGGTCGCCTATCCTGATGTCGAGTTCGCGGTCGACGAACGAGCGGCGGCGAGCGCCCGTGCGGTCTTCGAGCAACGACGAATCGAGCACGCGACCCGAGCGCGCGTGGCCGGCATGGTCGCCGACGGCATCCAGTGA
PROTEIN sequence
Length: 278
MGEPETDRPSMRAFRIAYDGRGYWGFQRQPDVETIEDEFFEALRALGILDESARKPEGYAAAGRTDRGVSALAQTIGLRCPAWCTPRALNAELPGAIRAWASADVPSDFHATHDPELREYTYYLYAPEADRELLEAALDALSGTHDLRDLTPDERNTTRTLETDLEDNALLFVLRVRAGGFARELVRRLVALVRSVATGERPFSHVERVLAEERLDGGAGVGPAPAYPLVLTEVAYPDVEFAVDERAAASARAVFEQRRIEHATRARVAGMVADGIQ*