ggKbase home page

sw_4_scaffold_4332_3

Organism: SW_4_Halobacteriales_64_12

partial RP 18 / 55 BSCG 13 / 51 ASCG 20 / 38 MC: 1
Location: comp(464..1423)

Top 3 Functional Annotations

Value Algorithm Source
tRNA pseudouridine synthase Pus10 {ECO:0000256|HAMAP-Rule:MF_01893}; EC=5.4.99.- {ECO:0000256|HAMAP-Rule:MF_01893};; tRNA pseudouridine 54/55 synthase {ECO:0000256|HAMAP-Rule:MF_01893}; TaxID=1227456 similarity UNIPROT
DB: UniProtKB
  • Identity: 59.3
  • Coverage: 329.0
  • Bit_score: 389
  • Evalue 4.40e-105
tRNA pseudouridine synthase Pus10 n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N2P2_9EURY similarity UNIREF
DB: UNIREF100
  • Identity: 59.3
  • Coverage: 329.0
  • Bit_score: 389
  • Evalue 3.10e-105
tRNA pseudouridine 55 synthase archaea similarity KEGG
DB: KEGG
  • Identity: 62.3
  • Coverage: 321.0
  • Bit_score: 377
  • Evalue 4.50e-102

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Halococcus salifodinae → Halococcus → Halobacteriales → Halobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 960
ATGCGGACGGGCACGGAGGTCGACTTCGAGCGCCCGGACGTGCTCTGTATGCTCGACATCCAGCGCGAAACCGTCGAGGTGCAGGTCAACCCGGCCTTTCTCTACGGCCGCTATCGAAAGCTCGAGCGCGACATTCCCCAGACCGAGTGGCCCTGCTCAGCCTGTGGGGCAACGGGCAAGCAACTCGCGCCCGATGGAGGCGAACAGGACTGCACGGAGTGTGGGGGCAGTGGCTATCGCTACGACGACAGCGTCGAAGGGCTGACCGCGCCCATCGTCCGGGAGGCGATGGACGGCAGCGAGGGCGTCTTTCACGGTGCCGGCCGCGAGGACGTCGACGCGAAGACCCTGGGGACGGGCCGGCCCTTCGTTCTCGAAGTCAAACACCCGCGAGTCAGGGACGTCGATCCCGAAGCAATCGAGGCGGCGATCGACGAGTCGACCGACCTGATCGAGGTCGAGGGCCTGCGCCGGGCGCAGCATACGATGGTTGAGCGGGTAAAAGAACTCGAAGCCTCGAAGACCTACTCCCTCACTGTTCGCTTCGCCGAACCGGTGAGCGAATCGAATCTGAAAGAAGCCTGCGGGGCCCTCGTCGGCGAGACGATTTCCCAGCGCACTCCCAGCCGGGTCGATCACCGGCGCGCCGACATCGTGCGGGCCCGGGAGGTGTACGCGGTCGAAGGGACGCTCGAGCCCGACCCGGTGGCGAGCGCCGAGCGCGCCGAGAACGCCGGAAGCGACGCGAGCGAGGAAACGAGCGAAAGTCGGCACGCGACGATCGAGGTCCACGGTGCCGGCGGGCTCTACGTGAAGGAACTCGCCCACGGCGACGAGGGCCGCACGGAGCCCAGTCTCGCGTGCTTGCTGGGCACCGACATCGAGATCGAGGCACTCGACGTGCTCGCGGTCGAAGGCGAGGGCGAACCGTTCGAGAGAAGCGAGTACTTCGTCGAGTGA
PROTEIN sequence
Length: 320
MRTGTEVDFERPDVLCMLDIQRETVEVQVNPAFLYGRYRKLERDIPQTEWPCSACGATGKQLAPDGGEQDCTECGGSGYRYDDSVEGLTAPIVREAMDGSEGVFHGAGREDVDAKTLGTGRPFVLEVKHPRVRDVDPEAIEAAIDESTDLIEVEGLRRAQHTMVERVKELEASKTYSLTVRFAEPVSESNLKEACGALVGETISQRTPSRVDHRRADIVRAREVYAVEGTLEPDPVASAERAENAGSDASEETSESRHATIEVHGAGGLYVKELAHGDEGRTEPSLACLLGTDIEIEALDVLAVEGEGEPFERSEYFVE*