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sw_4_scaffold_11208_1

Organism: SW_4_Salinibacter_ruber_66_13

partial RP 29 / 55 MC: 3 BSCG 28 / 51 MC: 5 ASCG 6 / 38 MC: 2
Location: 347..973

Top 3 Functional Annotations

Value Algorithm Source
rpoD; RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 59.8
  • Coverage: 184.0
  • Bit_score: 208
  • Evalue 1.80e-51
rpoD; RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily id=24658079 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber similarity UNIREF
DB: UNIREF100
  • Identity: 59.8
  • Coverage: 184.0
  • Bit_score: 208
  • Evalue 6.40e-51
RNA polymerase sigma factor {ECO:0000313|EMBL:CBH25282.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter similarity UNIPROT
DB: UniProtKB
  • Identity: 59.8
  • Coverage: 184.0
  • Bit_score: 208
  • Evalue 9.00e-51

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Taxonomy

Salinibacter ruber → Salinibacter → Bacteroidetes Order II. Incertae sedis → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 627
ATGGCCCGCAGCGACGAAGACGATGCCCCCGATGATCCGCTCTCGGAAGCGGCCGTGCGGCGCGCGCAGCAGGGGGACGAAGCGGCCCGGAATGCGCTCTACCGCGCCGCCGAGCCCATCCTGCGCGCGTACTTCACCAGGAACATCGGCGGACCGGTCCCCGCCCTGGACGATCTCGTGCAGAACACGCTCGTGCGCCTCCACGACAGCCTGGCCGGCCTCCAGAAGCCCGGCAGCTTCAAGTCTTTTCTCATGAAGGCGGCCCTCTACGAACTCCAGGACTACTACCGGGGCCGCTACGACATGAAAGAGACCCTCTACGCCCCAGACGTACCCCCCGAGCAGACCGGCGGCGCCCCGCTGGACGACCGTCTGACCGACGGCGTGCCCTCCGAGGACGAAATGGACGTGGAGCGCGCCCTCGACGCCCTTTCCGCGAAGGCGCGCCGCGTCATCGAGTTGCGCGAGTACGGCTACCGCTACAAAGAGATCGCCCGCATGACCGGCACCACTGAGGCGGCCATCAAAATGCAGGTCAAGCGCGCCTTCGACACCATGCGCGAGGCGTTGGCAGTGCTGGGCGGACTGCTGGGGCCCGCAGGCGCCCTGCTCGCGCCATTTTTGTGA
PROTEIN sequence
Length: 209
MARSDEDDAPDDPLSEAAVRRAQQGDEAARNALYRAAEPILRAYFTRNIGGPVPALDDLVQNTLVRLHDSLAGLQKPGSFKSFLMKAALYELQDYYRGRYDMKETLYAPDVPPEQTGGAPLDDRLTDGVPSEDEMDVERALDALSAKARRVIELREYGYRYKEIARMTGTTEAAIKMQVKRAFDTMREALAVLGGLLGPAGALLAPFL*