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sw_4_scaffold_4048_5

Organism: SW_4_Salinibacter_ruber_66_13

partial RP 29 / 55 MC: 3 BSCG 28 / 51 MC: 5 ASCG 6 / 38 MC: 2
Location: comp(3133..3858)

Top 3 Functional Annotations

Value Algorithm Source
RNA 2',3'-cyclic phosphodiesterase {ECO:0000256|HAMAP-Rule:MF_01940}; Short=RNA 2',3'-CPDase {ECO:0000256|HAMAP-Rule:MF_01940};; EC=3.1.4.- {ECO:0000256|HAMAP-Rule:MF_01940};; TaxID=761659 species="Ba similarity UNIPROT
DB: UniProtKB
  • Identity: 42.3
  • Coverage: 201.0
  • Bit_score: 133
  • Evalue 4.30e-28
2'-5' RNA ligase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H9I0_SALRM similarity UNIREF
DB: UNIREF100
  • Identity: 42.3
  • Coverage: 201.0
  • Bit_score: 133
  • Evalue 3.00e-28
ligT; 2'-5' RNA ligase similarity KEGG
DB: KEGG
  • Identity: 42.3
  • Coverage: 201.0
  • Bit_score: 133
  • Evalue 8.60e-29

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Taxonomy

Salinibacter ruber → Salinibacter → Bacteroidetes Order II. Incertae sedis → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 726
ATGGGAGGGGAAAAGCTGCAAGGACTCTTACCCGGCACAGCGGGCAGAGTTGCGCGCCCCCGGTTGAAAACTGCGGCCCAGACGCCGGACATTTTTATTTTGGATTGGCCCGTTCGGGACCTCCCCCGTTCGGGACCTCCCCCGTTCGGGACCCCCAACCGCAAGTCGCAAGTCGTAAATCCCGTGCCGCGCCTCTTTGCCGCCCTCGACCCGCCGGGCCCCGCCCGCAAAGCCGTGGACACGCTGCGCACGGATGACCTCGACGGGGCGCGCCGAACGCCGCCGGAGCAGTACCACCTCACGCTTCGCTTCTTCGGCGATGTGGGCGAAGAACGCGCCCCCGCCGTCGAAGACGCGCTCGCCGGCGTAGACGCCGAAGCGCCCGCGTTGCGCAGCACCGGCCTCATCGCGCTGCCGTCGCGCCGCCGCCCGCGCGTGCTGGCAGTGACCTTCGCGCGCACCGAAGCGCTGAAGACGCTACACGAGCAGGTCGAAGCGGCGGCCCGTGCGTTGGGTTTCGAGGCAGAGACGCGTCGCTTTCGCCCGCACCTCACCTTCGCCCGGCTGAACGAGGCCGACCCGCAGGCCGTCGTCCGCTTCCTGCGCACCCAGCCCGTGCCCGACGTGTCGTTCACCGCGTCGGCGTTTCACCTCTACGAGAGCGAATTGCGCCCCGACGGCGCCCGGCACCAGCGCCGCGCCGCGTTTGCGCTGGAAGGACGTTGA
PROTEIN sequence
Length: 242
MGGEKLQGLLPGTAGRVARPRLKTAAQTPDIFILDWPVRDLPRSGPPPFGTPNRKSQVVNPVPRLFAALDPPGPARKAVDTLRTDDLDGARRTPPEQYHLTLRFFGDVGEERAPAVEDALAGVDAEAPALRSTGLIALPSRRRPRVLAVTFARTEALKTLHEQVEAAARALGFEAETRRFRPHLTFARLNEADPQAVVRFLRTQPVPDVSFTASAFHLYESELRPDGARHQRRAAFALEGR*