ggKbase home page

sw_4_scaffold_5910_1

Organism: SW_4_Salinibacter_ruber_66_13

partial RP 29 / 55 MC: 3 BSCG 28 / 51 MC: 5 ASCG 6 / 38 MC: 2
Location: 2..358

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SE10_RHOMR similarity UNIREF
DB: UNIREF100
  • Identity: 50.0
  • Coverage: 116.0
  • Bit_score: 108
  • Evalue 3.90e-21
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 50.0
  • Coverage: 116.0
  • Bit_score: 108
  • Evalue 1.10e-21
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:AEN72002.1}; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" s similarity UNIPROT
DB: UniProtKB
  • Identity: 50.0
  • Coverage: 116.0
  • Bit_score: 108
  • Evalue 5.50e-21

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhodothermus marinus → Rhodothermus → Bacteroidetes Order II. Incertae sedis → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 357
CTCGATCCTGACCGGTCGCTCAAGTCGCTGCTCTACACCCTCGTTCGCAACGAAGCGCTCAACCAGCGCCGCGCCATGCGCCGCCGTCAGGACCGTCACGCCGAATATTCGCCGAGCCGGCAGCCGTCCCCCTCGGACGAGGTGGACTCCGACGCCCTCCGCACCCGGATGCGAGCGTGGATCGATGACCTGCCGGAGCGGCAACGCGAGGCCTTTCGGCTCAGCCGGTTTGACGACCTCACGCACGACGAGATTGCCGACGTGATGGACATTGCACCGCGAACGGTGACCAACCACGTGACGAAGGCCCTGCAGACCCTGCGGGACCGCCTCGACGACCACCGGTCGACGAACTAG
PROTEIN sequence
Length: 119
LDPDRSLKSLLYTLVRNEALNQRRAMRRRQDRHAEYSPSRQPSPSDEVDSDALRTRMRAWIDDLPERQREAFRLSRFDDLTHDEIADVMDIAPRTVTNHVTKALQTLRDRLDDHRSTN*