ggKbase home page

sw_4_scaffold_6547_1

Organism: SW_4_Salinibacter_ruber_66_13

partial RP 29 / 55 MC: 3 BSCG 28 / 51 MC: 5 ASCG 6 / 38 MC: 2
Location: 2..646

Top 3 Functional Annotations

Value Algorithm Source
Ribosome maturation factor RimM n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MHG4_RHOM4 similarity UNIREF
DB: UNIREF100
  • Identity: 55.4
  • Coverage: 175.0
  • Bit_score: 188
  • Evalue 9.20e-45
16S rRNA processing protein RimM similarity KEGG
DB: KEGG
  • Identity: 55.4
  • Coverage: 175.0
  • Bit_score: 188
  • Evalue 2.60e-45
Ribosome maturation factor RimM {ECO:0000256|HAMAP-Rule:MF_00014, ECO:0000256|SAAS:SAAS00006662}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae similarity UNIPROT
DB: UniProtKB
  • Identity: 55.4
  • Coverage: 175.0
  • Bit_score: 188
  • Evalue 1.30e-44

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhodothermus marinus → Rhodothermus → Bacteroidetes Order II. Incertae sedis → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 645
CGTCCGTGTCCTGCCGCCTCCGTCCACGCCCCTCGCCCAGTCGGTGCCCGCCGCCAAGCCCCCAGCGCCGTGCCCGGATCCAACGCCCCTGACGACGCGCCCGGCTCCGCGACTGCTCCGGACGACCTCCTGCTGATCGGCCGCGTCCTCAAGGCGCATGCCAACGACGGCGAGGCCAAGGTCGCCCCCGAAACCGACGACCCGGCCCGTTTCGAGCCGCTGGAGCGCGTCTACCTGGGCCGTACGCCCGGCCAAGCCGCGCCGCGCCGCGTCGAGGGCGTGCGGCACCAGACCACCAAGCGCGGCCCGCTCGTCCTGCTCAAGCTCGACGGCGTAGACGACCGCGCCGCCGCTGAGGCGCTGCGACGCCAGCAGGTCTACGCCGCCAAAGACGACCTGCCGCCGCTGGGCGAGGACGAAGCCTTCATCCACGACCTCGTCGGGCTGGCGGTCGTGACCGAGGAGGGCCGGCGGCTCGGCACCGTCGAGGGGGTCGAGCAAGCTCCCGCGCACGATGTATTCATCGTCGCGCGCGAAGGCGAAGACGGCGACCCGGCGATGATTCCCAGCGTCGAGAAGTTCGTGCGCGAGGTAGACCTCGAAAACGACCGCCTCGTCGTCCGGCCCATCGAAGGAATGTTTTGA
PROTEIN sequence
Length: 215
RPCPAASVHAPRPVGARRQAPSAVPGSNAPDDAPGSATAPDDLLLIGRVLKAHANDGEAKVAPETDDPARFEPLERVYLGRTPGQAAPRRVEGVRHQTTKRGPLVLLKLDGVDDRAAAEALRRQQVYAAKDDLPPLGEDEAFIHDLVGLAVVTEEGRRLGTVEGVEQAPAHDVFIVAREGEDGDPAMIPSVEKFVREVDLENDRLVVRPIEGMF*