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sw_4_scaffold_11547_1

Organism: SW_4_Viridiplantae_55_7

partial RP 24 / 55 MC: 8 BSCG 15 / 51 MC: 1 ASCG 15 / 38 MC: 6
Location: comp(746..1249)

Top 3 Functional Annotations

Value Algorithm Source
Photosystem I subunit II, chloroplast n=1 Tax=Micromonas pusilla (strain CCMP1545) RepID=C1N6J0_MICPC similarity UNIREF
DB: UNIREF100
  • Identity: 59.3
  • Coverage: 135.0
  • Bit_score: 153
  • Evalue 2.60e-34
Photosystem I subunit II {ECO:0000313|EMBL:JAC69812.1}; TaxID=582737 species="Eukaryota; Viridiplantae; Chlorophyta; Chlorodendrophyceae; Chlorodendrales; Chlorodendraceae; Tetraselmis.;" source="Tetr similarity UNIPROT
DB: UniProtKB
  • Identity: 58.5
  • Coverage: 147.0
  • Bit_score: 156
  • Evalue 4.20e-35
photosystem I protein PsaD similarity KEGG
DB: KEGG
  • Identity: 76.1
  • Coverage: 67.0
  • Bit_score: 107
  • Evalue 3.50e-21

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Taxonomy

Tetraselmis sp. GSL018 → Tetraselmis → Chlorodendrales → Chlorodendrophyceae → Chlorophyta → Viridiplantae

Sequences

DNA sequence
Length: 504
ATGGCGCAGACTGCGGTGGCAAGCGGTGCTAGGGCCAGCGGGCAGGCACTGGCCAGGAGGGAGCAGAAGGGGCGAAATGGATGCGCAGGCAAGCGCGGCGCAGTGACGCCGATGGCGCAGGAGCAGGCGGCGCCAGAGGAGAAGTCTGAGAAAAAGGAGAAGAAGGAGTGGACACCCCCACCCCTTGACCCAAACACGCCCACGCCCATCTTTGGTGGCAGCACGGGCGGCCTCCTCCGGAAGGCACAGACAGAAGAGTTCTACGTCATCACCTGGGCATCCAAGAAGGAGCAGCTCTTCGAGATGCCCACTGGCGGCTCTGCCATCATGCGCGAGGGAAACAACCTCCTCAAGCTCGCGCGCAAGGAGCAGTGCCTCGCCCTCCTCGCCCAGGTTCGCTCTCTCAACACTCAACGCTCTTCTTTTTCACTCTGCTTTCATAGCCAGTGCTTTGATCCCATTCCTCTGCTGTTTGGAGCAGCTTCGCAGCAAGTACAAAATTGA
PROTEIN sequence
Length: 168
MAQTAVASGARASGQALARREQKGRNGCAGKRGAVTPMAQEQAAPEEKSEKKEKKEWTPPPLDPNTPTPIFGGSTGGLLRKAQTEEFYVITWASKKEQLFEMPTGGSAIMREGNNLLKLARKEQCLALLAQVRSLNTQRSSFSLCFHSQCFDPIPLLFGAASQQVQN*