ggKbase home page

sw_4_scaffold_11986_2

Organism: SW_4_Viridiplantae_55_7

partial RP 24 / 55 MC: 8 BSCG 15 / 51 MC: 1 ASCG 15 / 38 MC: 6
Location: 108..1430

Top 3 Functional Annotations

Value Algorithm Source
Uncharacterized protein n=1 Tax=Prunus persica RepID=M5WWE6_PRUPE similarity UNIREF
DB: UNIREF100
  • Identity: 27.0
  • Coverage: 230.0
  • Bit_score: 76
  • Evalue 8.00e-11
Coffea canephora DH200=94 genomic scaffold, scaffold_12 {ECO:0000313|EMBL:CDP04520.1}; TaxID=49390 species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnolioph similarity UNIPROT
DB: UniProtKB
  • Identity: 25.0
  • Coverage: 248.0
  • Bit_score: 77
  • Evalue 6.60e-11
pentatricopeptide repeat-containing protein At5g50280, chloroplastic-like similarity KEGG
DB: KEGG
  • Identity: 24.5
  • Coverage: 216.0
  • Bit_score: 74
  • Evalue 9.60e-11

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Coffea canephora → Coffea → Gentianales → asterids → Streptophyta → Viridiplantae

Sequences

DNA sequence
Length: 1323
ATGCTCCGCCAGCGAGTCACGATCCCCTTCGCCCCTGTTCGTGCACATATCGCTCAACTCGCTTGGCTCTGTTCAACCCGCAGCAAGAGCAGCAGCAACAAAGGTACCACCAATGCCCCCCCATCACTCCGCAAGCAGCTACGCGAAGCTGCGCACAGAAAGCATCCCGAATCCACGCTTGCTGCGCTGCAGCAAATAGAGCGAACCGGACGGCCTCCACGGTTGCATGAATACGACACCGCCCTCGACGCCTTCACCAACGGCGCACCAGAAAACGCAGAAGCACTGCTGCAGCGCATGCAGCGCACAGGCGGCTCTAACGTTCTCACCTCCCAGCGCCTTCACAAGCTTCTCAAGGCATACGTTTCAGCCACGGATGCTGAGGGCGCCGAGCGCACGCTCTCACGCATTCACGAAGTGGAAATGAGCGGGAACATCATCGAGTATAACATGCTGCTTGACTGCTACGCCAACGCCGGCGACACGCACAAGGCGTGGGCGCTCTTCCAGCAGCTCGACTCGTCTGAAAAGCGGTTAAAACCCAGGCAGGTCACATATTGTAGCCTTGTCAAGGCGCACGCAAACAACGAGGATGCTGAGGGCGTTATGAAGGTGCTCTCCCTCATGAAGGAGCGCAATATCGAACCCAACGTCGTAGCGCAGACCATGGCTGCATCAACGCTTGCGGCGAATGGCAGATCAGAGGAGGCTGGTGCACAGCTGGCAGCAATGGAGGCATCACGCTCAGTGAAACCGACGTCGAAGACCTATTCATCCGTCATCTGGAGCTTTGGTCGCGCAAAGATGCCGGAGAAAGCACACGAGACGTTTGTTCGTGCGCTCAGGGTGCTTCAGGAGCCAGACATGGGAGTCTACCTCGTGACGATCGAGACGCTGTGCTGGAACAGAAATTTGCAAGCAGCGATGAGCATTGCTGGCGATATGCTCCGGTGGAAGGCGCCTTACTGTTCTTGGAAAGGGTACCAGTGCGTCGACATGCATGAGGTATCGCGAATGAGCGCCCCTGTGGCTCTAGTGGTGGCGATGTACCAGCTGCAAATACACCTAATGGGAGTAATTACAGGCGGTGGATCGCGCGGGATTTCAAAGCGCAAGCCAAGTCTGCAAGATACTGTGAAGAGATGTGCAACGTCGCTCGGGTGCAGTGTGCGGGTCCCACAGCGAAATCAGGGCATTGTGATCGTTGAAAACATTCAGAGTAAGGTCACAGAGAAGTACAGTATGGATTATGCATGCAGGGTTGCATATCAGAGCGCACGCGAAGCGAATGCGACGCACAAAGGGGAAGAAGCAGGGTATTAG
PROTEIN sequence
Length: 441
MLRQRVTIPFAPVRAHIAQLAWLCSTRSKSSSNKGTTNAPPSLRKQLREAAHRKHPESTLAALQQIERTGRPPRLHEYDTALDAFTNGAPENAEALLQRMQRTGGSNVLTSQRLHKLLKAYVSATDAEGAERTLSRIHEVEMSGNIIEYNMLLDCYANAGDTHKAWALFQQLDSSEKRLKPRQVTYCSLVKAHANNEDAEGVMKVLSLMKERNIEPNVVAQTMAASTLAANGRSEEAGAQLAAMEASRSVKPTSKTYSSVIWSFGRAKMPEKAHETFVRALRVLQEPDMGVYLVTIETLCWNRNLQAAMSIAGDMLRWKAPYCSWKGYQCVDMHEVSRMSAPVALVVAMYQLQIHLMGVITGGGSRGISKRKPSLQDTVKRCATSLGCSVRVPQRNQGIVIVENIQSKVTEKYSMDYACRVAYQSAREANATHKGEEAGY*