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sw_4_scaffold_12134_1

Organism: SW_4_Viridiplantae_55_7

partial RP 24 / 55 MC: 8 BSCG 15 / 51 MC: 1 ASCG 15 / 38 MC: 6
Location: 1..846

Top 3 Functional Annotations

Value Algorithm Source
WD40 repeat protein n=1 Tax=Micromonas pusilla (strain CCMP1545) RepID=C1MPD1_MICPC similarity UNIREF
DB: UNIREF100
  • Identity: 53.1
  • Coverage: 258.0
  • Bit_score: 269
  • Evalue 5.40e-69
WD40 repeat-like protein {ECO:0000313|EMBL:EIE24945.1}; TaxID=574566 species="Eukaryota; Viridiplantae; Chlorophyta; Trebouxiophyceae; Coccomyxaceae; Coccomyxa.;" source="Coccomyxa subellipsoidea C-16 similarity UNIPROT
DB: UniProtKB
  • Identity: 53.2
  • Coverage: 252.0
  • Bit_score: 269
  • Evalue 7.60e-69
WD40 repeat-containing protein similarity KEGG
DB: KEGG
  • Identity: 36.8
  • Coverage: 261.0
  • Bit_score: 158
  • Evalue 2.20e-36

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Taxonomy

Coccomyxa subellipsoidea → Coccomyxa → Trebouxiophyceae → Chlorophyta → Viridiplantae

Sequences

DNA sequence
Length: 846
TTAAGCGGAAGCTATGACTGCACAGTTCGTGCTTGGGACCTGAAACGCTTGAAGCACGCCAAGGTAATGTCCGCCCATGATGATGCCGTGCGCACCCTGGTCGTCTGCAACAACACGCTCTTCAGCGCCAGCTACGACACCACTATCTGCGCCTGGGACATCGAACATACCAGCAAGCGCGGCAGCCTGCGCGGGCACGAGGGTCCAGTTCGCTCCCTCGCTGTTGCTGGAAATCGTGTCTTCAGTGGCAGCTATGACAAAACGGTGCGGTGCTGGGATGTCGACACTTTGCGGGAGGTCGAGGGATCTCCGCTCCTCGGGCACGCCGACGCAGTTCGCGCGTTGGTTGCGTTTAATGACTCGCTCGTCTTCAGCGGCAGTGACGATCGCACTGTTCGAGCGTGGTGTGTTAACACACTTGAGTTCCTCGCGGTGCTCAAGGGTCACACTGACAACGTCAGAGTGCTCACAGCGGACTCGCGCTTCGTGTACTCGGGCTCGTGGGACCACTCTATTTGTGTGTGGGATGCGCACACGCTTTCGCTTGTGGACAGGCTCACAGGGCACACGGAGGCGGTGCTGGCACTAGCAGCAGCAGATGGCACGCTTGCGAGCGGCTCTTTCGACACGACGCTGCGGTTGTGGTCGATCGAGGACGGGTTTAAGTGCATACAAGAGTTGAGAGGGCACGAAGACGCCATACGAACGCTTGCATCCTCGGGCGAGGCTATCTTCTCGGGGTCATACGACGGCTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGCATCAGCAGAAAGAGACAGTGGCTGAGAAGACGAGCATGA
PROTEIN sequence
Length: 282
LSGSYDCTVRAWDLKRLKHAKVMSAHDDAVRTLVVCNNTLFSASYDTTICAWDIEHTSKRGSLRGHEGPVRSLAVAGNRVFSGSYDKTVRCWDVDTLREVEGSPLLGHADAVRALVAFNDSLVFSGSDDRTVRAWCVNTLEFLAVLKGHTDNVRVLTADSRFVYSGSWDHSICVWDAHTLSLVDRLTGHTEAVLALAAADGTLASGSFDTTLRLWSIEDGFKCIQELRGHEDAIRTLASSGEAIFSGSYDGXXXXXXXXXXXXXXXXXCISRKRQWLRRRA*