ggKbase home page

sw_4_scaffold_12341_1

Organism: SW_4_Viridiplantae_55_7

partial RP 24 / 55 MC: 8 BSCG 15 / 51 MC: 1 ASCG 15 / 38 MC: 6
Location: 1..855

Top 3 Functional Annotations

Value Algorithm Source
Ribosome biogenesis protein WDR12 homolog n=1 Tax=Chlorella variabilis RepID=E1ZSS2_CHLVA similarity UNIREF
DB: UNIREF100
  • Identity: 37.2
  • Coverage: 290.0
  • Bit_score: 166
  • Evalue 2.90e-38
Ribosome biogenesis protein WDR12 homolog {ECO:0000256|HAMAP-Rule:MF_03029}; TaxID=554065 species="Eukaryota; Viridiplantae; Chlorophyta; Trebouxiophyceae; Chlorellales; Chlorellaceae; Chlorella.;" so similarity UNIPROT
DB: UniProtKB
  • Identity: 37.2
  • Coverage: 290.0
  • Bit_score: 166
  • Evalue 4.10e-38
hypothetical protein; K14863 ribosome biogenesis protein YTM1 similarity KEGG
DB: KEGG
  • Identity: 32.3
  • Coverage: 294.0
  • Bit_score: 156
  • Evalue 1.20e-35

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Chlorella variabilis → Chlorella → Chlorellales → Trebouxiophyceae → Chlorophyta → Viridiplantae

Sequences

DNA sequence
Length: 855
CATGGTGTTAGCGGTGCCACCTGCGCCTCCCCGATTCATCCTAACGAAGATGGGGATATGAGCACTGCTGCAGTCGTCTCTGGAGGAAAAGATGGCGCGCTGCGCTTGTGGAATAGATCATTACAGGTGCTGCAGGACTTGTCTGGAGTGCATGACTCCGCAGTGCAGGCACTTGCGAGTCACGGCGTCGTGGCTGCTTCCAGTGCTTGGGACGGCGATGTGAAGCTGTGGAAAGTTAGCCGCTCGGACCGTCGCAGCCGGAAGTCGCAAAAGATGGACGAGGATCACGCTGCATCAAGCGATGGAATGCCCGAGCTTATGGAGATTTTCCATGTCAAGTCGTTGCACAGCACCTGTGTCAGCGGATTAAGCATGCTCAGACAAGGCACCCTAGCGACAGCATCGTGGGATCACAGCGCAAAACTCATCGACGTTGAAACGCAGGCACAGACAGCTGCCTTACATTTGAACAAAGCGCTTATATCTGTCGCAGCGCCAACGGCGCACGAAAGGCAGGACGACGAGCATCAGCCGCATACCGTGGCGTTAGGAGCGGCGGACAAAGCGGTGCGATTATGGGACACACGAAAAGGCGGGAGTACGGCGACGCAGATGCGAGCGCACACCTCCTGGGTGAGCGCAGTGCGCTGGTGTCCAGGGAGCGAGACACACCTGGCAAGCGCGTCGTATGACGGGAGCGTGATGCTCTGGGATGTCAGAGCTGAGGTGCCTCTACACAGAGTGAGGGCGCACAATGGAAAGGCGTTTGATGTGGGTTGGTGCTCAAGCTCACTGATTGCATCTGGAGGGGCGGACTCGCAACTAAAGCTGCACACAGTGTCGTTAGGTGGGTAA
PROTEIN sequence
Length: 285
HGVSGATCASPIHPNEDGDMSTAAVVSGGKDGALRLWNRSLQVLQDLSGVHDSAVQALASHGVVAASSAWDGDVKLWKVSRSDRRSRKSQKMDEDHAASSDGMPELMEIFHVKSLHSTCVSGLSMLRQGTLATASWDHSAKLIDVETQAQTAALHLNKALISVAAPTAHERQDDEHQPHTVALGAADKAVRLWDTRKGGSTATQMRAHTSWVSAVRWCPGSETHLASASYDGSVMLWDVRAEVPLHRVRAHNGKAFDVGWCSSSLIASGGADSQLKLHTVSLGG*