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sw_4_scaffold_12343_1

Organism: SW_4_Viridiplantae_55_7

partial RP 24 / 55 MC: 8 BSCG 15 / 51 MC: 1 ASCG 15 / 38 MC: 6
Location: 1..1278

Top 3 Functional Annotations

Value Algorithm Source
PREDICTED: LOW QUALITY PROTEIN: probable ATP-dependent RNA helicase DHX35-like n=1 Tax=Fragaria vesca subsp. vesca RepID=UPI0002C3483B similarity UNIREF
DB: UNIREF100
  • Identity: 31.1
  • Coverage: 450.0
  • Bit_score: 213
  • Evalue 3.10e-52
ATP-dependent RNA helicase DDX35 {ECO:0000313|EMBL:JAC71198.1}; Flags: Fragment;; TaxID=582737 species="Eukaryota; Viridiplantae; Chlorophyta; Chlorodendrophyceae; Chlorodendrales; Chlorodendraceae; T similarity UNIPROT
DB: UniProtKB
  • Identity: 32.8
  • Coverage: 461.0
  • Bit_score: 223
  • Evalue 4.20e-55
ATP-dependent helicase similarity KEGG
DB: KEGG
  • Identity: 26.8
  • Coverage: 470.0
  • Bit_score: 110
  • Evalue 1.00e-21

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Taxonomy

Tetraselmis sp. GSL018 → Tetraselmis → Chlorodendrales → Chlorodendrophyceae → Chlorophyta → Viridiplantae

Sequences

DNA sequence
Length: 1278
TGTGTGGATGTTGCAATCAGCCTCCACGCTGAGGAGAATGCTCGTGGCGATGTTCTTGCGTTCCTTCCTAGCGAAGCCGATGTGAGGCTCGCCCTCACGGCCGCCAGGGAGCGCGCTGAGAGCAGCGCGCTTGTGATGTGCCTATTCGAGGATCAACCGGACTGGCAGAAACGTGAAGCTTGTGTGCAGCACTCGAAGCCCAGAATTGTGCTCGCAACGCCTTTCGCTGAGTGCGACATCGCGATCGATGGCATCGTGCACGTGGTTGACAGCATGTTCTCTACGCAGTGGTTCTTTAACGCGTCGAAACGAGCGCACGTGCAGTGTACGCAACCAGTCGACAAGGCAACGGCGTATCAGCGCGCAACACGCGCTGGCAAAGAACAGATCGGGTCGCACAGCGGCATCTGCTACCGGATGTGCACGGAAAGCACGTTTGCAAACCTTCATGATCGCCCAAAACCGGGCGTGCAGGCAGATGAGCTCACACGGACTGTACTCACGATCAAAGCGGCTTCGCACATCACCCTTGCGCTCCAGAACCTGCACGCGCTCGGCGCAATCGGCGACGACGGCAAGCTCACATCCCCCACTGGGCAGATCATGACGGAACTTGACGTCGATCCTTTCGACGCAAAGGCGCTGCTTGCATCTGGTGAGCTCGGCTGCTCGCGTGAGTTGATCGCGGCGGTTGCGTGTGCGCACCAGTCGCAGATATTCTCTGCTGATTCACACAGCACTGCATCACGGCAAAGTAGGCGCGAGACTCACCAGCAGGAGTCGCGTGCACACTCGCGCTTCGGCGTGGTCGAGGGCGATCACTTGGCGTACGTGAACGCGATGAGGGCGTTCCTTGAGCACGACCAGTCGCGCAGATTCTGCGATCAGGAGTGCTTGCACTTTGATGCACTCCAACGCGCGGTGAGAAGGCGCGATGAGCTTGAGAAGCAGCTGCGAAGGCACGGAGTGGCGATGGGACTCTCTGGTGAGAGTACAGAGCCGCTGATGAGCGCGATCGCCGCTGGGTACTTCATGAACGCCGCTCGGAGCAGCGGCAACGACGGAACCTCTGAGATGTATCGCACAGTTCAAGGCAATCAGCCTGTCCGGATCCACAAGAGTTCGTGCATCGCGACGGCACCGCCGTCACTGATTGTGTACCGCAGGGCGCTCCAGGAGGAAGGGCAGGATTGCCCTCGCGTGTACGATGTCAGCTCTGTAAGTGAGGAGAAGCTTAGATACGCTGCGCCTCACTACTTCGCTGAACGACCAGCCTGA
PROTEIN sequence
Length: 426
CVDVAISLHAEENARGDVLAFLPSEADVRLALTAARERAESSALVMCLFEDQPDWQKREACVQHSKPRIVLATPFAECDIAIDGIVHVVDSMFSTQWFFNASKRAHVQCTQPVDKATAYQRATRAGKEQIGSHSGICYRMCTESTFANLHDRPKPGVQADELTRTVLTIKAASHITLALQNLHALGAIGDDGKLTSPTGQIMTELDVDPFDAKALLASGELGCSRELIAAVACAHQSQIFSADSHSTASRQSRRETHQQESRAHSRFGVVEGDHLAYVNAMRAFLEHDQSRRFCDQECLHFDALQRAVRRRDELEKQLRRHGVAMGLSGESTEPLMSAIAAGYFMNAARSSGNDGTSEMYRTVQGNQPVRIHKSSCIATAPPSLIVYRRALQEEGQDCPRVYDVSSVSEEKLRYAAPHYFAERPA*