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sw_4_scaffold_12878_1

Organism: SW_4_Viridiplantae_55_7

partial RP 24 / 55 MC: 8 BSCG 15 / 51 MC: 1 ASCG 15 / 38 MC: 6
Location: 1..612

Top 3 Functional Annotations

Value Algorithm Source
TPR-like protein n=1 Tax=Coccomyxa subellipsoidea C-169 RepID=I0YQI0_9CHLO similarity UNIREF
DB: UNIREF100
  • Identity: 34.8
  • Coverage: 178.0
  • Bit_score: 96
  • Evalue 2.70e-17
TPR-like protein {ECO:0000313|EMBL:EIE20649.1}; TaxID=574566 species="Eukaryota; Viridiplantae; Chlorophyta; Trebouxiophyceae; Coccomyxaceae; Coccomyxa.;" source="Coccomyxa subellipsoidea C-169.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 34.8
  • Coverage: 178.0
  • Bit_score: 96
  • Evalue 3.70e-17
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 29.4
  • Coverage: 187.0
  • Bit_score: 84
  • Evalue 4.30e-14

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Taxonomy

Coccomyxa subellipsoidea → Coccomyxa → Trebouxiophyceae → Chlorophyta → Viridiplantae

Sequences

DNA sequence
Length: 612
GTTGCATACAAGCTCTTCGAGCGTGCAAACGAGCTGCACCCTTCCTCAGCAAGTGTTCTTCGACCCTGGGCGTTGCATGAGCGCAAGCACGGAAACGTTGAAAACGCAAGATCGCTTTTCCGTGAGGCATCAACCTGTGCGAACGTATCTGAGGAAACCTTCCTCCAGTGGGGTTTCTTTGAGAAGCGAATGAACCGAATATCTGCAGCTCGGAGCATTTTTAAAGACGGGCTCATCAGGTTCCCACGATCAGCGCCCTTGTGGTATGCAGCGGCGATGCTTGAGTCACAGCATGGAGCTGGATTAGCGCAGCCGATCAACCTGCTGCAGCAGGCGCTTGATATGTGCCCCAACGACCCGTCGCTTCGGATGGAGCTTGCACTTGCTTTGTGGCACGACGGAAACATCAGCCGAGCTAGAAAGCAGTTCGATTGTGGATTGAAAATCAGGCCGATCCATGTCCCGCTTGTGCAAGCATGGGCTGATTTTGAGCAGCACTGCGGTGAGCTTCAGCGTGCTACACGTCTCCATCAAGCAGCGCAGGCGCTTGAGAAGCAACAGATGCACGAACGCCAGCACAGCCGAAGCAGCTCAAAATATGATGGCACATAA
PROTEIN sequence
Length: 204
VAYKLFERANELHPSSASVLRPWALHERKHGNVENARSLFREASTCANVSEETFLQWGFFEKRMNRISAARSIFKDGLIRFPRSAPLWYAAAMLESQHGAGLAQPINLLQQALDMCPNDPSLRMELALALWHDGNISRARKQFDCGLKIRPIHVPLVQAWADFEQHCGELQRATRLHQAAQALEKQQMHERQHSRSSSKYDGT*