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sw_4_scaffold_13076_1

Organism: SW_4_Viridiplantae_55_7

partial RP 24 / 55 MC: 8 BSCG 15 / 51 MC: 1 ASCG 15 / 38 MC: 6
Location: 559..1155

Top 3 Functional Annotations

Value Algorithm Source
Predicted protein n=1 Tax=Micromonas pusilla (strain CCMP1545) RepID=C1N3F4_MICPC similarity UNIREF
DB: UNIREF100
  • Identity: 39.6
  • Coverage: 187.0
  • Bit_score: 119
  • Evalue 4.90e-24
Rhomboid protein Panut_PARL {ECO:0000313|EMBL:AIY60697.1}; TaxID=101712 species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Pandanales similarity UNIPROT
DB: UniProtKB
  • Identity: 42.0
  • Coverage: 157.0
  • Bit_score: 123
  • Evalue 4.70e-25
rhomboid family protein similarity KEGG
DB: KEGG
  • Identity: 34.1
  • Coverage: 138.0
  • Bit_score: 76
  • Evalue 7.80e-12

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Taxonomy

Pandanus utilis → Pandanus → Pandanales → Liliopsida → Streptophyta → Viridiplantae

Sequences

DNA sequence
Length: 597
ATGTTGCGGCAAGCAAGCTTGCATTTCCGACGAGCGCTGCACACATGCGCCGGCACGCCAGAACGAGCAGTCACAACACTCATTGGCGCGAACGCTGCTATTTACTGCGGCTGGCAGCTACCAAACGAGCGCTTTCAGAAGAATGTAATGGTTCGTCACTTTCTTCTCACACCGGCAAACATCAACTCAGGAAGGCTGCACACAACCATCACATCTGCTTTCTCGCACACGGACACAACGCACCTACTGAGCAACATGCTCGCGCTGTACTTCTTCGGATCTCGCGTTGCCTCTGCAATTGGCCCAGCTAGGCTTCTTGGCGTGTACTTGTTTGGCGGGTTCGCCGGCGGGGTTGCGCACCTGTACAATGCGCCTGGTCGTCGCCGTGGTATTGTTACACAACCAAGCTCGAAGAAGCGCTACTGGGATATCGTGCCATTCAGTGCTAGACCGGCACTTGGTGCTTCTGGCTCTGTGAACGGCCTTATCGCGATATATGCGCTCCTCTTCCCTTTCGAGACTGTACGTTTGCTCGCTCATTTGCATTGGCATCACTACAGCTATCTGCAAGCCTTCATTGTCCGTTTCGAACTATGA
PROTEIN sequence
Length: 199
MLRQASLHFRRALHTCAGTPERAVTTLIGANAAIYCGWQLPNERFQKNVMVRHFLLTPANINSGRLHTTITSAFSHTDTTHLLSNMLALYFFGSRVASAIGPARLLGVYLFGGFAGGVAHLYNAPGRRRGIVTQPSSKKRYWDIVPFSARPALGASGSVNGLIAIYALLFPFETVRLLAHLHWHHYSYLQAFIVRFEL*