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sw_4_scaffold_16777_1

Organism: SW_4_Viridiplantae_55_7

partial RP 24 / 55 MC: 8 BSCG 15 / 51 MC: 1 ASCG 15 / 38 MC: 6
Location: 3..875

Top 3 Functional Annotations

Value Algorithm Source
yjbC; RNA pseudouridine synthase (EC:5.4.99.-) similarity KEGG
DB: KEGG
  • Identity: 37.9
  • Coverage: 240.0
  • Bit_score: 146
  • Evalue 1.20e-32
WGS project CAID00000000 data, contig chromosome 06 n=1 Tax=Ostreococcus tauri RepID=Q016A8_OSTTA similarity UNIREF
DB: UNIREF100
  • Identity: 42.0
  • Coverage: 274.0
  • Bit_score: 200
  • Evalue 3.20e-48
Pseudouridine synthase, RsuA/RluB/E/F, conserved site {ECO:0000313|EMBL:CAL53753.1}; TaxID=70448 species="Eukaryota; Viridiplantae; Chlorophyta; prasinophytes; Mamiellophyceae; Mamiellales; Bathycocca similarity UNIPROT
DB: UniProtKB
  • Identity: 42.0
  • Coverage: 274.0
  • Bit_score: 200
  • Evalue 4.50e-48

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Taxonomy

Ostreococcus tauri → Ostreococcus → Mamiellales → Mamiellophyceae → Chlorophyta → Viridiplantae

Sequences

DNA sequence
Length: 873
AGAGGGAAGAAGAGTGGGAGCAACAGCCAAGCGCCGAAACTTGGGAAAGCTCTTGCGGACGCTGGCGTTGGCAGCCGCAGGCGATGCGAGCAGCTAATTGCCGAGGGACGTGTAACTGTGAACAGTGAGATCGTGCACAATGTTGCTGAGCGCATCCAGGTTCGCCACGACTCTGTGTCTGTTGACGGCTCTCTGGTACGCGGCAAAGGAGCCCACCTCCCTCCGAAGCTCTACTTGGCTGTCAACAAGCCAACGCAGTATATCTGCAGCTCCGTAAGCAACCCCTCCGTTGGCGTGAGCAAGCAGAATAAGCGCGTCATTGACCTTGTGGACAGCTACTTGAACACCCAGCAGCGTAAGCGCACGACAGAACGTCCTCCACGGCTTTTCACTGTTGGACGCCTCGACGTTGCCAGCGAGGGGCTCATCCTCGTCACGAATGACGGAGCGTTCGCCGATAAAGTGATGCACCCGCGCAATGAGGTTGTAAAGGAGTATGTCGTCACCGCCGAAGCTAAACCCACATGGCGCCAGCTCCGGAATATGCTGAATCAGGGTGCCATGATTGAAGGGAAAAGGGTAATTCCCCTCCGATGCGATCGTGTTGAGCCTATGGATGGCGGCTCACCCAACCGCTTTGTTGTCGAGGTTGTTGATGGTCGGAAGCACGAGGTGCGCGAACTGTGCGCCCAGAATGGCGTCCATGTACACAGGCTAAAGCGCGTGCGGATCGGTGGCCTAAAGATACCACCATCAATCTCCAACAAACCTGGAGCAACCGTTGAGCTTCGAACGCATGAGGTGAAGCGAGTCACCTCCAAGTCGGCAATGAACAACCAAGAGTCGAATAGCTATGCTCCCGTAATCAGCTGA
PROTEIN sequence
Length: 291
RGKKSGSNSQAPKLGKALADAGVGSRRRCEQLIAEGRVTVNSEIVHNVAERIQVRHDSVSVDGSLVRGKGAHLPPKLYLAVNKPTQYICSSVSNPSVGVSKQNKRVIDLVDSYLNTQQRKRTTERPPRLFTVGRLDVASEGLILVTNDGAFADKVMHPRNEVVKEYVVTAEAKPTWRQLRNMLNQGAMIEGKRVIPLRCDRVEPMDGGSPNRFVVEVVDGRKHEVRELCAQNGVHVHRLKRVRIGGLKIPPSISNKPGATVELRTHEVKRVTSKSAMNNQESNSYAPVIS*