ggKbase home page

sw_4_scaffold_18418_2

Organism: SW_4_Viridiplantae_55_7

partial RP 24 / 55 MC: 8 BSCG 15 / 51 MC: 1 ASCG 15 / 38 MC: 6
Location: 1016..1501

Top 3 Functional Annotations

Value Algorithm Source
Probable polyribonucleotide nucleotidyltransferase 1, chloroplastic n=1 Tax=Oryza sativa subsp. japonica RepID=PNP1_ORYSJ similarity UNIREF
DB: UNIREF100
  • Identity: 47.7
  • Coverage: 172.0
  • Bit_score: 139
  • Evalue 2.20e-30
Uncharacterized protein {ECO:0000313|EnsemblPlants:ORUFI07G04110.1}; TaxID=4529 species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Po similarity UNIPROT
DB: UniProtKB
  • Identity: 47.7
  • Coverage: 172.0
  • Bit_score: 139
  • Evalue 3.10e-30
polynucleotide phosphorylase/polyadenylase similarity KEGG
DB: KEGG
  • Identity: 48.7
  • Coverage: 154.0
  • Bit_score: 134
  • Evalue 2.60e-29

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Oryza rufipogon → Oryza → Poales → commelinids → Streptophyta → Viridiplantae

Sequences

DNA sequence
Length: 486
ATGGTGGCGGAAGTAAGCCTTTCCAATGAAAATGATGATGGCACTGACAGCAAGCTGCCCAACGCGCTCATTGGCGACGCCTTCGAGAGGCAATGCAAAAAATTCGTGCGCGCATCGTTATCTGAAGGCTTGACACGGCAGGACGGCCGGGCTGCCGACGAGCTTCGGCCGATATCTGCATCAAGCGGCAGGATGCTCCCCAATGCACACGGGTCGGCAATCTTTCGTCGTGGCGAAACGCAAGCTATTGGTGCGGTGCAGCTTGGCTCAGATTACGAGCGGCAACAAGTTGACTCGCCCACGCGCCCTGGCCCCAAACGCTTCTCACTGGATTACTACTTTCCCCCCATGAGCGTTGGTGAGACCGGACGCCTTGCAGGGATGCCGTCTCGCCGCGAGGTTGGTCATGGTGCTCTTGCTGAGCGGGGACTAAAACCGATTGTTCCGCCCAAGTCTGATTTTGCACACAATATTCGTGTCGAAAGC
PROTEIN sequence
Length: 162
MVAEVSLSNENDDGTDSKLPNALIGDAFERQCKKFVRASLSEGLTRQDGRAADELRPISASSGRMLPNAHGSAIFRRGETQAIGAVQLGSDYERQQVDSPTRPGPKRFSLDYYFPPMSVGETGRLAGMPSRREVGHGALAERGLKPIVPPKSDFAHNIRVES